KEGG T00249: PFL

Pseudomonas protegens Pf-5: PFL_6096

Entry

PFL_6096          CDS       T00249

Name

(GenBank) Rhs family protein

Organism

pfl Pseudomonas protegens Pf-5

SSDB

Motif

Pfam:

RHS_repeat DUF6531 RHS PAAR_motif

Other DBs

NCBI-ProteinID:

AAY95284

UniProt:

Q4K3M9

Structure

Position

6925413..6929873

AA seq 1486 aa
MSDALWAARLGDGLEHTSMMADILGGVLEVAANVAIGALATMAVAAAAGITVATGGLGAC
VLGLVVGVVVGVVMSKTGADKGLSNLCEGIANALFPPSIQATIASGSKKVLTNNKPAARA
AGIAPPTQISGDGAEEGEATDTPSATPEEGPGFLDMAKEFFSQMWRPTVASPAPGSQTKE
LDLVTCTKHPPMPVQYLAEGSEKVSIDGQPAVRSGDRSTCDAKVVSAGPISPNVTIGGGS
VVVREIRSGKTPGVGLAVTVLMMLKGGKGKFLSNLPCMLMAGVNSFVVSQATNALTQAVV
ASTHPVHAATGAKVLGADDDLDFTLPGLMPIEWQRFYNSRDERRDGLLGAGWSLPYEISV
QIEPHPEGGERLLYIDEQGRRIDMGSIALGAGAFSPGEGLSVRRNENGQLLIESSDGIYR
LFEPLPGDSSRLRLSLLGDRNDNRLHLEYDSSGRLWLLRDTFEQAQLELSYSTLWPGRIA
QVERLYPDQQREVLVSYDYDAAGDLAQVRDSEGQVQRRFAYDAGHRMIEHQLATGLRCFY
QWTQFADQQWRVTRHWTDEGDSYQYDYDLEAGITQVTDSLQRLSRRRWNSQLQIVEYTDN
LNQTWAFEWNDERQLLSATDPLGGRYAYSYDETGNLIAETDPLGHSHSTLWLEHWSLPQT
LTDPAGESWHLRYDPRGNCIAEVDPLGQVTQYRHDAHGQVVEIIDAAGRSRKMRWNSSGQ
LLEHLDCSGYPTRFEYDRRGNVKAIIDALGEHTRFHYDCQGRLLSSQLADGRAEHFQRSS
NGQLQGYTDPSGYTTLYQYNRRGQIRQRIDAHGRQVRFDYDAYGRLLALTNENGESYRFA
WDAGNRLSEQQDLDGSAKRYGYDLLNNVVELQSHPAPYGTGLSAVPAQPIAPIIHRFERD
AVGRLLAKITDDGRSQYTYDPLNQLTAASFTDNLGNQQALSFSYDALGQLLEEHTVAGSL
IHRYDELGNLTQTQLPDKRWLNRLYYGSGHLHQINLDGQVVSDFQRDRLHREVLRTQGQI
STRSEYDRCGRLRARLQHSSLLANTLPTAPERHLEYDDSDNLVGLAERHATGQHRQLFHY
DATGRIIASQDGLQGQKETFAYDAAANLLDGPKAGAGLVVHNKLLTYQDKRYRYDAFGRM
IEKRSGRRGVQRFAYDAEHRLIEVRNQTSSGETLVRMRYDVLGRRISKSEYDSQGNLLGE
TRFVWDGLRLLQEQRNQQTSLYVYEDLGHAPLARVDGLGAQQKIRYYHNDLNGLPQQLCE
PDGHSVWQARYQVWGNTVEEIREPYYIEEQNLRFQGQYLDRETGLHFNTFRFYDPDIGRF
TTPDPIGLAGGLNLYQYAPNPIGWIDPLGWICKSAYSGRRGTTKAKADLERNGFTVVGEE
LTMKVKHPVTQKSYRIRADIIAKDKAGNYHVFEVKNGSGKLTKNQQGSGMFDMSNPANTN
GGLGGGLIKPSGATQGQFEVATKTARGTQFGGNGAQHSATFWLLRY

NT seq 4461 nt +upstreamnt +downstreamnt
atgtctgacgcactgtgggccgcccgcctgggtgacgggctggaacacacctcgatgatg
gccgacattctcggcggtgtgctggaggtggcggccaacgttgccatcggcgccctggcg
accatggcagtagccgcggcggcaggcatcaccgtggccaccggcggcctcggcgcctgt
gtgctggggctggtggtgggcgtcgtcgtcggcgtggtcatgagcaagaccggagccgac
aagggcctgagcaatttatgcgagggtatcgccaacgccctgttcccgccctcgatccag
gccaccatcgccagcggctcgaaaaaggtcctgaccaacaacaagccggcggcccgcgcg
gccggcatcgcaccgccgacacagatcagcggcgacggcgccgaagaaggcgaagccacc
gacaccccgtcggcaacgcccgaggaagggcccggtttcctcgacatggccaaggagttt
ttctcgcagatgtggcggcccaccgtggcctccccggcgccaggctcccagaccaaggaa
ctggacctggtgacctgcaccaagcacccgccgatgccggtgcagtatctggctgaaggc
tcggaaaaggtcagcatcgacggccagccggcagtacgcagcggcgaccgcagcacctgc
gatgccaaggtagtgtcggccgggcctatctccccgaacgtgaccatcggcggtggctcg
gtggtggtgcgcgagatccgtagcggcaagaccccgggggtgggcctggcggtgaccgtg
ctgatgatgctcaagggcggcaagggcaagttcctcagcaacctgccgtgcatgctgatg
gccggggtcaattcctttgtcgtcagccaggccaccaatgctttgacccaggccgtcgtc
gcctcgacccacccggtgcatgcagccaccggggccaaggtgctcggagccgacgacgat
ctggatttcaccctgcccgggctgatgcccatcgaatggcaacgcttctacaacagccgc
gacgaacgtcgtgacggcctgctcggggccggctggagcttgccttacgagatcagcgtc
cagatcgagccccaccccgaaggtggcgagcgtctgctctacattgatgagcaaggacgc
cgcatcgacatgggctccattgccctgggtgcaggagccttcagccccggtgaaggcttg
agcgtgcgacgcaacgagaacggacagttgctgatcgaaagcagcgacggtatctaccgt
ctgttcgagccgctgccgggcgactcctcgcggctgcgcctgagcctgctgggggaccgc
aacgacaaccgtctgcacctggagtacgactcgtccggacgcctctggctgctgcgtgac
acctttgaacaggcgcagctcgaactgagctacagcacgctctggcccggtcggattgcc
caggtcgaacggctgtaccccgaccagcaacgggaagtgctggtcagctatgactacgat
gcggcaggagacctggcacaggtgcgcgatagcgaaggccaggtacagcgtcgcttcgct
tatgacgccggccaccggatgatcgaacatcaattggccaccgggctgcgctgcttctat
caatggacacaatttgccgaccagcagtggcgagtgacccgtcactggaccgacgaaggc
gatagctatcagtacgactatgatctggaggcgggaatcacccaggtcaccgacagcctg
caacgcctcagccgccgccgctggaacagccagttgcagatcgtcgagtacaccgacaac
ctcaaccagacatgggccttcgagtggaacgatgagcgccaactgctcagcgccaccgac
cccttgggagggcgctatgcctatagctacgacgaaaccggcaacctgatagccgagacc
gatcctctggggcacagccattcgaccttgtggctggagcactggtcgctgccacagacc
ctgaccgatcccgccggagaaagctggcacctgcgctacgatccccggggcaactgtatc
gccgaagtagacccgctgggccaggtgacccagtaccgccatgacgcgcacggccaggtg
gtggagatcatcgatgccgcgggaagaagccggaagatgcgctggaactcgtccgggcaa
ttgcttgaacacctggactgctcgggctatccaacccgcttcgaatacgatcgacgcggc
aacgtgaaagccatcatcgatgcccttggcgagcacacccggttccattacgactgccag
ggacggttgctgagcagccaactggccgatgggcgcgccgagcattttcaacgcagcagc
aacggccagctacagggctacaccgacccttccggctacaccacgctctaccagtacaac
cggcgcgggcagatacgccagcgcatcgacgctcacggccgacaggtccggttcgactat
gacgcgtacggacggctgctggcgctcaccaacgagaacggcgaaagctatcgctttgcc
tgggacgccggcaaccgcctgagcgaacagcaggacctcgacggcagtgccaaacgctat
ggctatgacctgctgaacaacgtcgtcgaactccagtcccaccccgccccttatggcacc
gggctgagcgccgtgcccgcgcaacctatcgcgccgatcatccaccggttcgagcgcgat
gccgtggggcggctgctggccaaaatcacagacgatggccgcagccaatacacctacgac
cccttgaaccaactgaccgccgccagctttaccgacaacctcggcaaccagcaggcactg
agtttcagctacgacgccctgggccaattactcgaagaacacaccgtggccggcagcctg
atccatcgatacgacgaactgggcaatttgactcagacccagctaccggacaagcgttgg
ctcaaccggctctattacggcagcggccatctgcaccagatcaatctcgatggccaggta
gtcagcgactttcaacgtgaccgcctgcaccgtgaggtgctgcgcacccagggtcagatc
agcactcgcagcgaatacgaccggtgtggccgcctgcgcgcacgcctgcagcattccagc
ctgctggcaaacaccttgccaacagccccggagcgacacctggagtacgacgatagcgat
aatctggtgggcctggccgagcgacatgccaccgggcaacatcggcaactgttccattac
gacgcgaccgggcgaatcattgccagccaggacggcctgcagggccagaaagaaaccttc
gcctatgacgccgccgccaatttgcttgatggcccgaaggcgggcgccgggctggtggtg
cacaacaaattgctgacctaccaggacaagcgctaccgctacgatgccttcgggcgaatg
attgaaaaacgcagtggtcggcgaggcgtgcaacgttttgcctacgacgccgaacaccgg
ttgatcgaagtgcgcaatcagacctccagcggcgaaaccctggtcaggatgcgctacgac
gtcttgggtcgccgcatcagcaagagcgagtacgacagccagggcaaccttctgggtgaa
acgcgattcgtctgggatggcctgcggctgctgcaggaacagcgtaatcaacagaccagc
ctctatgtctatgaagacctgggacatgcgcccctggcgcgggtcgacggccttggcgcg
cagcagaagatccgctactaccacaacgacctgaatggcctgcctcaacagctttgcgag
cctgacggccatagcgtctggcaggcccgctatcaggtctggggcaatactgtcgaagaa
atacgcgagccctactacatcgaggaacagaatctcaggttccagggccagtacctggac
cgcgagactggattgcacttcaacacgttccgtttctacgacccggatatcgggcgcttc
accacgccggaccccatcggcctggccggaggcttgaacctttatcagtacgctcccaac
ccaatcggttggatcgatccgctgggctggatctgcaaatcggcctacagcggcagaagg
ggcactacaaaagccaaagctgacctcgagaggaacggtttcactgtggtaggtgaagaa
ttgaccatgaaggtcaaacaccctgtcacccagaagtcctatcgcatcagggcagatatc
atcgccaaggacaaagccggcaactaccacgtgttcgaagtcaaaaatggcagcggcaaa
ctgaccaagaaccaacagggatcgggaatgttcgacatgagcaatccggccaatactaac
ggtggcctgggcggtggcctgatcaaaccgtcgggcgctacccaaggccagttcgaagtt
gcgaccaaaaccgccagaggtacccagttcggtggcaatggcgcacagcattcggccacc
ttctggcttcttcgctattga

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (9)   

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