KEGG   Pyrolobus fumarii: Pyrfu_0180
Entry
Pyrfu_0180        CDS       T01620                                 
Name
(GenBank) transcription termination factor Tfs
  KO
K03057  transcription factor S
Organism
pfm  Pyrolobus fumarii
Brite
KEGG Orthology (KO) [BR:pfm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfm03021]
    Pyrfu_0180
Transcription machinery [BR:pfm03021]
 Prokaryotic type
  Archaeal type
   Basal transcription factors
    TFS
     Pyrfu_0180
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD zinc_ribbon_2 TF_Zn_Ribbon zinc_ribbon_4 CPxCG_zf DZR zf-ribbon_3 zf-TFIIB OrfB_Zn_ribbon Zn_Tnp_IS1595 Nudix_N_2 YjdM_Zn_Ribbon Ima1_N zinc_ribbon_10 zf-FPG_IleRS Zn_ribbon_recom zf-NADH-PPase HVO_2753_ZBP zf-DNA_Pol DUF4379 GpA_ATPase DUF6237 Elf1 HypA RecR_ZnF DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: AEM38052
UniProt: G0EET8
Position
158335..158679
AA seq 114 aa
MKFCPRCGTLMAPRRENEQVVYVCPKCGHREGAAGAGDVASRVLVTTIKHSEKEKLVVIE
SNMEEKLLPKTRIQCPRCSHDEAYYWVVQTRRADEPPTRFYKCTKCGHVWREYD
NT seq 345 nt   +upstreamnt  +downstreamnt
ttgaagttctgtccgcgttgtggcactctaatggcgcctcggcgtgaaaatgagcaagtg
gtttacgtgtgtcccaagtgtggacatcgtgaaggagctgcgggtgcaggtgatgttgct
agcagggtactagttacaacaattaagcacagtgagaaagaaaagcttgtagtcatagag
tccaacatggaagagaagctcctgccaaagacgcgtatacagtgcccgcgctgcagccac
gatgaggcctactattgggttgtgcagacgaggcgtgcagacgagccaccaacaagattc
tataagtgtacaaagtgcggccatgtctggagagagtatgactaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (41)   

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