KEGG T00283: Pfl01

Pseudomonas fluorescens Pf0-1: Pfl01_1614

Entry

Pfl01_1614 CDS T00283

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

pfo Pseudomonas fluorescens Pf0-1

Pathway

pfo00020	Citrate cycle (TCA cycle)
pfo00310	Lysine degradation
pfo00380	Tryptophan metabolism
pfo01100	Metabolic pathways
pfo01110	Biosynthesis of secondary metabolites
pfo01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:pfo00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:pfo00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:pfo00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh cwf21

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1803045..1805876

AA seq 943 aa
MQESVMQRMWNSAYLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQKLPADGSSATDVSH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQAAQLDPLGLWQ
RPAPADLSINHYGLTNADLDTTFRAGDLFIGKEEASLREIHEALQQTYCRTIGAEFTHIT
DSEQRQWFQQRLESVRGRPEYSADIKSHLLERVTAGEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDELIQRSGSYGTKEVVIGMAHRGRLNVLVNTFGKNPRELFDEFEGKKKVELGSGD
VKYHQGFSSNVMTTGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDPTGEKVLPISI
HGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQVGFTISNPLDSRSTEYATDVAKM
IQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVIDLVCYRRRGHNEADEPSGTQPLMY
QQITKQRTTRELYADRLTQAGVLDAERVQAKVDEYRNALDNGLHVVKSLVKEPNKELFVD
WRPYLGHAWTARHDTRFDLKTLQELSAKLLEIPEGFVVQRQVAKIYEDRQKMQAGGLPIN
WGYAETMAYATLAFEGHPIRMTGQDIGRGTFSHRHAVLHNQKDAGTYIPLKHLYEGQPRF
DLYDSFLSEEAVLAFEYGYSTTTPNALVIWEAQFGDFANGAQVVIDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEHNIQVCMPTTPAQIYHLLRRQVIRPLRKP
LVVLTPKSLLRHKLAISTLEDLAEGSFQTVIPEIDALDPKKVERVVLCSGKVYYDLLEKR
RAEGREDIAIVRIEQLYPFPEDDLKEVLAPYTNAKAAVWCQEEPMNQGAWYCSQHHLRRS
ISNLNKSLVLEYAGREASAAPACGYASMHAEQQEQLLQDAFTV

NT seq 2832 nt +upstreamnt +downstreamnt
atgcaagaaagcgtgatgcagcgcatgtggaacagcgcctacctttcaggtggaaacgct
gcctatgtggaagagctctacgagctctacctgcacgaccctaacgctgtgccagaagag
tggcgcacctactttcagaagctgcctgccgacggcagctctgccaccgatgtttcgcac
tccacaattcgcgatcatttcgtgctgctggcaaagaaccagcgccgcgcccaaccggtt
tccgccggcagcgtgagcagtgagcacgagaagaagcaagttgaagtgctgcgattgatc
caggcctaccgtatgcgtggccaccaggcagcccagcttgacccgctggggctgtggcag
cgtcctgcacctgcagacctgtcgatcaatcactacggcttgaccaatgccgatcttgat
acgaccttccgtgccggcgacctgttcatcggcaaagaggaagcgagcctacgcgaaatt
cacgaagcgttgcagcagacatattgccgcaccatcggcgctgaatttacgcacatcacc
gattccgagcagcgccagtggttccagcagcgtctggaaagcgtgcgtggccgtccggaa
tattccgcggacatcaagagccacctgctcgagcgcgtgacggccggtgaaggcctggaa
aaatacctgggcaccaaatacccgggcaccaaacgtttcggtctggaaggcggcgaaagc
ctgattccgatgctcgacgaactgatccagcgttccggttcctacggcaccaaggaagtc
gtcattggcatggcccaccgtggccgtctgaacgtactggtcaacaccttcggcaagaac
ccgcgcgagctgttcgacgagttcgaaggcaagaagaaggtcgagctgggttccggtgac
gttaaataccaccagggcttctcgtccaacgtaatgaccaccggcggtgaagttcacctg
gccatggcgttcaacccgtcccacctggaaatcgtttccccggtggtcgagggttcggtt
cgcgcccgtcaggatcgtcgcaacgaccctaccggtgagaaggttctgccgatctccatc
cacggtgatgctgcattcgccggtcaaggcgtggtcatggaaaccttccagatgtcgcag
acccgcggtttcaagaccggcggtaccgtgcacatcgtgatcaacaaccaggtcggtttc
accatcagcaacccgctggactcgcgctccaccgagtacgcgaccgacgttgcgaaaatg
atccaggcgccgatcctccatgtgaatggtgatgatccggaagccgtgttgttcgtgacc
cagctggccatcgactaccgcatgcagttcaagcgtgacgtggtgatcgacctggtctgc
taccgtcgtcgcggccacaacgaggccgacgagccaagcggcacccagcctctgatgtat
cagcagatcaccaagcagcgcaccacccgtgagctgtacgctgatcgtctgacccaggcc
ggtgtactggacgcagagcgtgttcaggcgaaagtcgacgaataccgcaacgcgctggac
aacggtctgcacgtcgtgaaatcgctggtcaaagagccgaacaaagagctgttcgtggac
tggcgtccgtatctgggccacgcctggactgcgcgtcacgacactcgcttcgacctcaag
accctgcaggaactgtccgccaagctgctggaaattccggaaggcttcgtggttcagcgt
caggtcgcgaagatctacgaagaccgtcagaagatgcaagccggcggcctgccgatcaac
tggggttacgccgaaaccatggcgtacgcgaccctggcgttcgaaggtcacccgatccgc
atgaccggtcaggacattggccgcggcacgttctcgcaccgtcacgctgtgctgcacaac
cagaaagatgccggtacctacattccgctcaagcatctgtatgaaggtcagccacgcttc
gacctgtacgactcgttcctgtcggaagaagccgtactggcgttcgaatacggctactcg
accaccacgccaaacgcgctggtgatctgggaagcccagttcggcgacttcgccaacggt
gcacaggtcgttatcgaccagttcatcaccagcggcgagcacaagtggggccgtctctgc
ggtctgaccatgctgctgccacacggttacgaaggtcagggccctgagcacagctcggca
cgtcttgagcgttacctgcagctgtgcgccgagcacaacattcaggtgtgcatgccgacc
accccggcccagatctaccacttgctgcgccgtcaggtgattcgcccgctgcgcaagcca
ttggtcgttctgactccaaagtcgctgctgcgccacaagctggccatctcgactctggaa
gatctggccgaaggttcgttccagaccgttatcccggaaatcgatgcactggacccgaaa
aaggtcgagcgcgttgttctgtgcagcggcaaggtctactacgacctgctggaaaaacgt
cgtgccgaaggccgcgaagatatcgccatcgtgcgtatcgagcagctgtacccgttccct
gaggacgacttgaaagaagtcctggctccttacaccaatgccaaagcggccgtgtggtgt
caggaagagccgatgaaccagggcgcctggtactgcagccagcaccacctgcgtcgcagc
atcagcaacctcaacaaatctctcgtactcgagtacgcgggccgtgaggcttctgctgcc
ccagcatgtggttacgcatcgatgcacgccgagcagcaggaacaactgctgcaagacgcg
tttaccgtttaa

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PFO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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