KEGG   Pseudozyma flocculosa: PFL1_04180
Entry
PFL1_04180        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K14778  ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7]
Organism
pfp  Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pfp03009]
    PFL1_04180
Enzymes [BR:pfp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PFL1_04180
Ribosome biogenesis [BR:pfp03009]
 Eukaryotic type
  90S particles
   Helicases
    PFL1_04180
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 19318287
NCBI-ProteinID: XP_007879895
UniProt: A0A061H6V7
Position
Unknown
AA seq 544 aa
MSPSAEASTSTAAAAAAAADVVSASPTDQPKHTTFSSIGISPMLIRSLASLSIKVPTPIQ
SLTLPSILAGRDLVGGAQTGSGKTLCFALPILNALMRDMVGGFAVVLTPTRELGVQLHEQ
FVAVGEGARMGLRCALVLGGMDMMKQAAELASQRPHVIVATPGRLVDHLRSGGGSEWGLN
RCRFLVLDEADRLLTQTFEPEISYLYSVLPPARSLQTLLFTATLTQEVEAFAQRKQPEGK
LPPMVCKIEMDASTPETLTQKYIFVPSHVREPYLYHLLRKPPVKPNAERLRKHKAKKRAE
RERDGERRGRMGGGGSSSSSKKKKPDGGKRGAYHDSDLEDSGDDSDPDAEGYFPSTIIFA
ARCRTAATLSKMLRQLDVPNVSLHSHLAQSERLDNLQAFRAQRVPILIATDVGSRGLDIP
DVEMVVNWDLPLAWQDYVHRVGRTARNGKAGHAVSFITERDIDVIQAIEAKINVKLTELE
GLDEEEVLQHLNKVATAKRIATMSLHHDKFGERQERNKKKAQLQIKAEKREKRKSGKGSS
AAAS
NT seq 1635 nt   +upstreamnt  +downstreamnt
atgtcgccctcggcagaggcgtccacatcgaccgccgccgctgccgccgcagccgcggac
gtcgtcagcgccagccccaccgaccagcctaagcacacgacgttttcctcgatcggcatc
tcgcccatgctcatccgctccctcgcatcgctcagcatcaaggtgcccacgccgatccag
tccctcaccctgccctcgatcctcgcgggccgcgacctcgtcggcggagcgcagaccggc
tccggaaagacgctctgctttgccctccccatcctcaacgccctcatgcgcgacatggtc
ggcgggttcgccgtcgtcctcacaccgacccgcgagctgggcgtgcagctgcacgagcag
tttgtcgccgtcggcgagggcgccaggatgggcctgcgttgcgcactcgtgctcggcggc
atggacatgatgaagcaggccgccgagctggcgtcgcagcgcccgcacgtcattgtcgcc
acgcccggccggctcgtcgaccacctccgcagcggcggcggatcagagtggggcctcaac
cgctgtcgcttcctcgtgctcgacgaggcggaccgcctcctcacccagaccttcgaaccc
gagatctcctacctctactcggtgctgccgcccgcccgctcgctgcagacgctcctcttc
accgccaccctgacgcaggaggtcgaggcgtttgcgcagcgcaagcagccagagggcaag
ctgccgccgatggtgtgcaagatcgagatggacgccagcacgcccgagacgctgacgcaa
aagtacatctttgtgccgtcgcacgtgcgcgagccgtacctctaccacctcctgcgcaag
ccgccggtcaagcccaacgccgagcggctgcggaagcacaaggcaaagaagcgcgccgag
cgcgagcgcgacggtgagcgacgagggaggatgggcggcggcggcagcagcagcagcagc
aagaagaagaagccggacggcggcaagcggggcgcctaccacgactcggacctcgaagac
tcgggcgacgactcggatccagacgccgagggctacttcccgtcgaccatcatctttgcc
gcgcggtgtcggacggcggccacgctgtccaagatgctgcgccagctcgacgtgcccaac
gtctcgctccactcgcacctggcgcagagcgaacggctggacaacctgcaggccttccgg
gcgcagcgggtgcccatcctcatcgcgaccgacgtgggctcgcgcggtctcgacattccc
gacgtcgagatggtcgttaactgggacctgccgctcgcctggcaggactacgtccaccgc
gtcggccgaaccgcgcgaaacggcaaggcgggccacgccgtcagcttcatcactgagcgc
gacattgacgtcatccaggccatcgaggccaagatcaacgtcaagctcaccgagctcgaa
ggtctcgatgaggaggaggtgctgcagcacctcaacaaggtcgccacggccaagcgcatc
gccaccatgtcgctccaccacgacaagtttggagagaggcaggagcgcaacaagaaaaag
gcccagctccagatcaaggccgagaagcgggaaaagaggaagagcggcaagggctcgtcg
gcggcggcgtcgtga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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