KEGG   Pragia fontium: QQ39_17590
Entry
QQ39_17590        CDS       T03952                                 
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pfq  Pragia fontium
Pathway
pfq03420  Nucleotide excision repair
pfq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    QQ39_17590 (uvrD)
   03430 Mismatch repair
    QQ39_17590 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfq03400]
    QQ39_17590 (uvrD)
Enzymes [BR:pfq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QQ39_17590 (uvrD)
DNA repair and recombination proteins [BR:pfq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     QQ39_17590 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     QQ39_17590 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor AAA_30 UvrD_C_2 AAA_22 PhoH
Other DBs
NCBI-ProteinID: AKJ43641
UniProt: A0A0G3CNT4
Position
complement(4027261..4029423)
AA seq 720 aa
MDVSYLLDSLNDKQREAVAASRTNMLVLAGAGSGKTRVLVHRIAWLLSVEHCSPYSIMAV
TFTNKAAAEMRHRIEQLIGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQH
RLLKRIVRALNLDEKQWVPRQAMWYINNKKDDGLRPQHIDTYGNPTEGTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLHKPQILNHYRERFTNILVDEFQDTNRIQYAWIRMLAGDT
SKVMIVGDDDQSIYGWRGAQVENIQRFLDDFPGAVTVRLEQNYRSTSNILKAANALIANN
DGRLGKELWTDGEQGEPISLYCAFNELDEARFVVNRIKTFQDGGGALNDCAILYRSNAQS
RVLEEALLQASTPYRIYGGMRFFERQEIKDSLAYLRLISNPNDDAAFERVVNTPTRGIGD
RSLDVIRHAARDRQVTLWQASVALLQEKVFAGRAAGAIQRFIELIEALTNETGELPLHVQ
TDRVIRDSGLRQMYEQEKGEKGQTRVENLEELVTATRQFSFQDEDMDLSPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFLQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFVGELPEDCIEEVRLRASVSRPVSHSRMG
TPISQNDSGYKLGQRVNHPKFGEGTIINLEGSGEHARLQIAFQGEGIKWLVASYARLEVL
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggacgtttcctacctgctagacagtttaaatgacaaacagcgcgaagccgttgcggct
tcccgtaccaatatgctggtgcttgccggtgcgggcagtgggaaaactcgagtattagta
catcgtattgcctggctgctatcggttgagcactgttctccttattccattatggcggtg
acgtttaccaataaggccgctgcggagatgcgtcatcgtattgaacagctgattggtacc
agccaagggggaatgtggattgggacgttccatggtctggctcatcgcttgctgcgggct
catcatcttgatgccaatctaccgcaggattttcagattctggacagtgaagatcagcac
cgcttgcttaagcgtatcgttcgggcgctgaatctggacgagaaacagtgggttcctcgt
caggccatgtggtatatcaacaataaaaaagacgatggcctgcgacctcagcacattgat
acttacggcaacccgacggaaggtacttggttacgcatttatcaggcctatcaggaagcc
tgcgatcgtgccggtttggtagactttgccgaattactgctgcgagcccatgaactgtgg
ctgcataaacctcagatactcaaccattatcgggagcgtttcaccaatattctggtggac
gaattccaggatactaaccgcatccaatatgcctggatccgcatgttagccggagacact
tccaaagtgatgatcgtaggtgatgacgatcagtcaatttatggctggcgcggtgctcag
gtagagaatattcagcgttttctggatgattttcccggtgctgttaccgtccgtttggaa
cagaactaccgttcaaccagtaatatactgaaggcggctaacgcgctaatagccaataat
gacggtcgattagggaaagaactctggactgatggtgagcagggcgaacctatttctttg
tactgtgcgtttaatgagttggatgaagcccgttttgtggttaatcggattaagactttt
caggatggcggcggtgctttaaatgattgcgcgatcctctaccgtagcaacgcacagtcg
cgggtgctggaagaagcgttattgcaggcttcaacgccttatcgtatttatggcggtatg
cgcttcttcgagcgacaggaaatcaaagattcgctggcttatttacgtttaatctccaat
cccaatgatgatgcggcttttgagcgcgtagtaaatacgccaacccgcggcattggcgat
cggtctcttgacgttatccgtcatgcggctcgcgatcgtcaggttaccctatggcaggct
tcggttgcattattgcaggagaaagtgtttgcgggccgggctgccggggcaattcagcga
tttattgaactgattgaagcgttaactaatgaaaccggtgaattgcctctgcatgttcag
accgatcgagtgattcgagattctggtctgcgtcagatgtatgagcaggagaagggcgag
aaaggccaaactcgggtcgaaaacctggaggaactggtaacggcaacccgtcagttcagt
tttcaggacgaagatatggatctgtcgccgttacaggcattcctctcccatgctgcgctg
gaagcaggagaaggtcaggcggatgcctatcaggatgcggttcagctcatgacattacac
tcggctaaagggctggagtttctacaggtgtttattgtcggtatggaagaggggatgttc
ccaagtcagatgtcgctggatgaaggcggccgactggaagaggaacgccgtctggcctat
gttggggtaacccgggcaatgcagaagctaacgctgacttacgcggaaactcgccgtctg
tacgggaaagaggtttatcaccgcccatcgcgctttgttggtgaactgccggaagactgt
attgaagaagtccgtctgcgtgccagtgtgtcgcgtccggttagccatagcagaatgggc
acaccaatcagccagaatgatagtggctataagctagggcagcgggttaaccatcctaaa
tttggtgaaggcacaattattaatctggaaggcagcggtgaacatgctcgtctgcaaatt
gcttttcagggtgaaggcattaagtggctggtggcgtcatacgcccgactggaagtgctg
tag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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