KEGG   Propionibacterium freudenreichii subsp. freudenreichii DSM 20271: RM25_2338
Entry
RM25_2338         CDS       T03860                                 
Name
(GenBank) CCA tRNA nucleotidyltransferase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
pfre  Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
Pathway
pfre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pfre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RM25_2338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfre03019]
    RM25_2338
Enzymes [BR:pfre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     RM25_2338
Messenger RNA biogenesis [BR:pfre03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     RM25_2338
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: AJQ92041
Position
2628144..2629634
AA seq 496 aa
MSDSSQALSVAQRHAVDELLRITPVIDELGALFHKAGEELYLVGGSVRDALLGRLGHDLD
FTTSADPDTTERLLHRFSSAVWTVGKEFGTIGASKKSNGHELQIEITTFRADAYEPDSRK
PIVAYGDNVQDDLVRRDFTVNAMAIDVHSKAFVDPHGGIRDLAAKVLRTPTAPEISFSDD
PLRMMRACRFAAQLGFKVDPVTFNAMKAMHERIEIVSPERVRDELSKLLLADAPRPGLNL
LVASGLADIVLPELPAMRLERDEHFRHKDVYEHSLTVLDQAIALEKARDYKDGKPNPHHQ
PDLVIRLAALLHDIGKPATRGLDGDKVTFHHHDIVGAKLARKRLRALHYPKAVVDAVGQL
IEQHLRFHGYGEASWTDSAVRRYVRDAGDQLEHLHILTRSDCTTRNARKADTLRRAYDEL
EARIDELAATEELKSIRPDLNGDEIMTILGIAPGPQVGRAYQHMLSVRMDQGPLDHDAAV
AELKRWWAAQPHPDAS
NT seq 1491 nt   +upstreamnt  +downstreamnt
gtgtccgattcttcgcaggccctgtctgttgcccagcgtcacgcggtggatgagctgttg
cgcatcacaccggtgatcgacgagctgggcgcgctgttccacaaagccggcgaggagctc
tacctggtgggcggttcggtgcgcgacgccctgttgggccgcctgggccacgacctcgac
ttcaccacctcggccgatcccgacaccaccgagcggttgctgcaccggttcagctccgcg
gtatggaccgtcggcaaggagttcggcaccatcggggcgtccaagaagtcgaacggccac
gagctgcagatcgagatcaccaccttccgcgccgacgcctacgagcccgattcgcgcaag
ccgatcgtggcctacggcgacaatgtgcaggacgacctggtgcgccgcgatttcacggtg
aatgcgatggccatcgacgtgcattccaaggcgttcgtcgacccccacggcggcatccgg
gacctcgccgcgaaggtgctgcgcaccccgacggcccccgagatcagcttcagcgacgat
ccgctgcgcatgatgcgggcctgccggttcgccgcccagctggggttcaaggttgacccg
gtcaccttcaatgcgatgaaggccatgcacgagcgcatcgagatcgtctcgcccgagcga
gtgcgcgacgaattgtcgaagctgctgctggccgacgcgccgcgcccgggcctcaacctg
ttggtggccagcggactggccgacatcgtgctgcccgaactgcccgcaatgcgcctggaa
cgcgacgagcacttccgccacaaggacgtctacgagcactcactgacggtgctcgatcag
gcgatcgcgctggagaaggcccgcgactacaaggacggcaagcccaacccccaccaccag
cccgacctggtgatccgcctggcggcgctgctgcacgacatcggcaagccggccacccgg
gggctggacggcgacaaggtcaccttccaccaccacgacatcgtgggcgccaagctggcg
cgcaagcggctgcgtgcactgcactatcccaaggccgtggtggacgcggtgggccagctc
atcgaacagcacctgcgctttcatggctatggcgaggcgagctggaccgattcggcggtg
cgccgctatgtgcgcgacgccggcgaccagctggagcacctgcacatcctcacccgcagc
gactgcaccacccgcaatgcccgcaaggccgacaccctgcgccgcgcctacgacgagctc
gaggcccgcatcgacgagctggccgccaccgaggagttgaagtcgatccgtcccgacctg
aacggcgacgagatcatgacgatcctgggcatcgcgccgggtccgcaggtgggccgggcc
taccagcacatgctgtcggtgcgcatggaccagggccccctcgaccatgacgccgcagtc
gccgagctgaagcgctggtgggccgcgcagccccacccggatgccagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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