KEGG   Pseudomonas fulva: Psefu_0291
Entry
Psefu_0291        CDS       T01501                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
pfv  Pseudomonas fulva
Pathway
pfv03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pfv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Psefu_0291
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfv03021]
    Psefu_0291
   03400 DNA repair and recombination proteins [BR:pfv03400]
    Psefu_0291
Enzymes [BR:pfv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Psefu_0291
Transcription machinery [BR:pfv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Psefu_0291
DNA repair and recombination proteins [BR:pfv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Psefu_0291
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AEF20275
UniProt: F6AF77
Position
complement(330910..331173)
AA seq 87 aa
MARVTVEDCLDNVDNRFELVMLATKRARQIATGGKEPKVAWENDKPTVVALREIASGLVD
AEIVAQEDIIEEEPLFAAFEEEANEPL
NT seq 264 nt   +upstreamnt  +downstreamnt
atggctcgcgttaccgttgaagactgcctggacaacgtcgataaccgcttcgagctggtc
atgcttgccaccaagcgcgctcgtcaaatcgccactggcggcaaagagccgaaagtagcc
tgggaaaacgacaagccgaccgtagtcgccctgcgcgaaatcgccagcggcctggttgac
gccgaaatcgtcgcccaggaagacatcatcgaagaagaaccgctgttcgcagccttcgag
gaagaggcgaacgagcctctgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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