KEGG   Pestalotiopsis fici: PFICI_12226
Entry
PFICI_12226       CDS       T04924                                 
Name
(RefSeq) ATP-dependent RNA helicase DHH1
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
pfy  Pestalotiopsis fici
Pathway
pfy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pfy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PFICI_12226
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfy03019]
    PFICI_12226
   03036 Chromosome and associated proteins [BR:pfy03036]
    PFICI_12226
Enzymes [BR:pfy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PFICI_12226
Messenger RNA biogenesis [BR:pfy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     PFICI_12226
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     PFICI_12226
Chromosome and associated proteins [BR:pfy03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    PFICI_12226
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1
Other DBs
NCBI-GeneID: 19277239
NCBI-ProteinID: XP_007838998
UniProt: W3WQ75
Position
Unknown
AA seq 525 aa
MSDQLAEKLRASTISDNNAGSSEDWKSNLNLPAKDARHQTEDVTNTKGLEWENFALKRDL
LMGIFEAGYEKPSPIQEESVPVALTGRDILARAKNGTGKTAAFVVPALERINPKVAKIQC
LILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDDIVRLQDPVHIVVGTPGRILD
LAGKNVADLSECPMFIMDEADKLLSQEFTPVIEQLLRFHPKDRQVMLFSATFPLSVKDFS
DKNMVNPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVE
LLAKKITELGYSCFYSHAKMAQHARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVIN
FDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYNIERDLGTEIQPIPQTIDKAL
YVYENPENIPRPANTLPPPRPAPANQNGQRSQQDQPQRQPINPGGQPGSNDPRQGGRGDG
QQRQSRGGYRGNNQGGRGRGGFQNRGGYNNYRGGGRGQQPQQPQA
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgtccgaccaattggcagagaagctccgcgcttcaacaatcagcgataacaatgcaggc
tcatcagaagactggaagagcaatctcaacctacctgcaaaagacgccaggcatcagact
gaggatgtgacaaacacaaagggactcgaatgggagaactttgccctcaagcgagaccta
ctaatgggcatttttgaagccggatacgaaaagccctccccaatccaggaggaatctgtc
cctgtcgccttaaccggtcgcgatattcttgctcgagcaaagaacggtactggcaaaaca
gctgcctttgtcgtgccggcactagagcgtatcaaccccaaggtcgccaagattcaatgt
ctcatcctcgtccccactcgagagctcgccatgcaaacctcgcaggtctgcaaaacgctc
ggaaagcaccttggaatcaatgtaatggttacaactggaggtactggcctcagagatgac
atcgttcgtcttcaggatcccgtccacatagtagtgggcactcccggacgtattctggat
ttggctggaaagaatgttgccgacctgagcgagtgccccatgtttatcatggatgaggcc
gacaagctcctttcccaagaattcacgcccgtcattgaacagctcctccgcttccacccc
aaggaccgccaggtcatgctgttttctgccactttccctctgtccgtcaaggacttttcg
gacaagaatatggtcaacccctacgagatcaacctcatggatgaactcacgctgcgtggt
attacccaatactacgcctttgttgaggagaagcaaaaggttcactgcctcaacactctg
ttctcgaaactgcaaatcaaccagtcaatcatcttctgtaactccactaaccgtgttgag
cttctcgccaagaagatcacggaactgggttactcgtgcttttacagtcacgccaagatg
gcgcaacacgcacgaaaccgcgttttccacgatttccgaaatggcgtgtgtcgcaacctt
gtttgctcggatctcctgactcgaggtattgacattcaggccgtgaatgtagtcatcaac
tttgactttcccaagaatgccgagacctacttgcaccgaattggtcgttctggacggtat
ggtcaccttggtctggctatcaacctgatcaactgggacgatcgattcaacctgtacaac
atcgagcgcgaccttggaactgagatccaacctattcctcagaccatcgacaaggcactt
tacgtttacgagaaccccgagaacatcccgcgcccagctaacaccctgccgcctcctcgc
cctgcccctgcgaaccagaacggccagcgctcccagcaggatcaaccgcagcgacagccc
atcaaccctggtggtcagccaggctcaaatgatcctcgtcaaggtggacgcggcgatggc
cagcagcgccagtcacgtggcggctatcgcggcaacaaccaaggtggacggggtcgtggt
ggcttccaaaacagaggtggctacaacaactaccgaggtggaggccgaggtcagcaacct
cagcaacctcaagcctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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