KEGG   Pseudomonas fragi: AV641_03425
Entry
AV641_03425       CDS       T04285                                 
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
  KO
K00557  tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
Organism
pfz  Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:pfz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pfz03016]
    AV641_03425
Enzymes [BR:pfz01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     AV641_03425
Transfer RNA biogenesis [BR:pfz03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    AV641_03425
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_25 Methyltransf_31 Methyltransf_4 Methyltransf_12 Methyltransf_11 Methyltransf_15 Cons_hypoth95 MTS RrnaAD DREV Met_10 Ubie_methyltran
Other DBs
NCBI-ProteinID: AMB78185
Position
complement(732255..733343)
AA seq 362 aa
MSALPFDSATYAIELEAKANRLRELLAPFDAPEPQVFDSPLKHFRLRAEFRLWREGGERH
YAMFAPDDKRTPILIEDFPIASLRINQLMPQLKAAWKASSALSHKLFQVEFQTTLSGDAM
VTLCYHRPLDEHWQTAAEQLAKDLDISVIGRSKGKRAVIGRDHVVEQLEVAGRTFTYQQP
EGAFTQPNGTVNQKMLNWAYEALGERQDDLLELYCGNGNFTLPLATRVRKVLATEISKTS
VYAALNNLRDNAVDNVTLVRLSAEELTEALNEVRPFRRLQGIDLKSYEFGSVFVDPPRAG
MDPDTCELTRRFDNILYISCNPATLAENIAQLHDTHRIERCAVFDQFPWTHHMESGVLLV
RR
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgagtgctttgccgttcgattctgctacctacgccattgagctcgaagccaaggccaat
cgcctgcgcgagctgctggcgcccttcgatgcacctgaaccccaggtgttcgactcgccc
ctcaagcactttcgcctgagggccgaattccgcctgtggcgcgaagggggcgaacgtcac
tacgccatgtttgcgccggatgacaagcgcacgccgatcctgatcgaagacttcccgatt
gccagcctgcgcatcaatcaactgatgccgcagctcaaggccgcctggaaagccagctcg
gccttgagccacaagctgttccaggtggagttccagaccactctgtccggcgatgcaatg
gtcacattgtgctatcaccgcccgctggacgagcactggcaaaccgctgccgagcagttg
gccaaagacctggatatcagcgtgattggccgctccaaaggtaaacgcgcggtgatcggc
cgtgatcacgtggtcgagcagctggaagtggcaggccgtaccttcacttatcaacagccc
gaaggtgcgttcacccagccaaacggcacggtcaaccagaagatgctcaactgggcatac
gaagcgttgggcgaacgtcaggatgatctgctggagctgtattgcggcaacggcaacttc
accctgccgctggccacccgcgtgcgcaaggtgctggctaccgaaatcagcaagacctcg
gtctatgccgcgctgaacaatctgcgcgacaacgctgtggataacgtgacgctggtgcgt
ctgtcggccgaagagctgaccgaggccctgaacgaagtacgtccgttccgccgcttgcag
ggcatcgacctgaaaagctacgagttcggcagcgtcttcgtcgacccgccacgcgcgggc
atggacccggacacctgcgagctgacccgacgcttcgacaacatcctgtacatctcctgc
aacccggccaccctggcggaaaacatcgcccagctgcacgatacccaccgtatcgaacgt
tgcgccgtgttcgaccagttcccctggacccaccacatggaatcgggcgtattgctggtt
cgccggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (21)   

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