KEGG   Pseudomyrmex gracilis (graceful twig ant): 109853441
Entry
109853441         CDS       T05003                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03018  RNA degradation
pgc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109853441
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109853441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgc03019]
    109853441
   03041 Spliceosome [BR:pgc03041]
    109853441
Messenger RNA biogenesis [BR:pgc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109853441
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     109853441
Spliceosome [BR:pgc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    109853441
 Complex C
  U2 snRNP components
    109853441
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 109853441
NCBI-ProteinID: XP_020281166
Position
Unknown
AA seq 96 aa
MLFYSFFKSLIGKDVVVELKNDLSICGTLYSVDQYLNIKLADISVTDSEKYPHMLSVKNC
FIRGSVVRYVQLPVDEVDIHLLTEAARREAMNAQTR
NT seq 291 nt   +upstreamnt  +downstreamnt
atgttgttctattccttcttcaaatcgttgatcggaaaagacgtggtcgtcgagttgaaa
aacgatctcagcatttgcggcacgttgtattctgtcgaccagtacttaaatatcaaacta
gcggatatcagcgtaacggactcagaaaaatatcctcatatgttgtcagtaaaaaattgc
ttcattcgtggatccgtggtgcgatatgtacagctgccggtagatgaagtagatatccac
ttgttgaccgaagcggcacgcagagaagcaatgaacgctcaaacgagatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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