KEGG   Porphyromonas gingivalis W83: PG_1036
Entry
PG_1036           CDS       T00145                                 
Symbol
uvrA-1
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
pgi  Porphyromonas gingivalis W83
Pathway
pgi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pgi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PG_1036 (uvrA-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgi03400]
    PG_1036 (uvrA-1)
DNA repair and recombination proteins [BR:pgi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PG_1036 (uvrA-1)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PG_1036 (uvrA-1)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 AAA_21 nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG AAA_25 AAA_22 AAA_23 Viral_helicase1 NACHT cobW
Other DBs
NCBI-ProteinID: AAQ66155
UniProt: Q7MVL7
Position
1098576..1101479
AA seq 967 aa
MHDTVINVKDKIARHDAVEVYGARVHNLKNIDVCIPRHSLTVITGMSGSGKSSLAFDTLF
AEGQRRYIETFSAYARNFLGGGMERPDVDEIKGLSPVISIEQKTTNRNPRSTVGTVTEVY
DFFRLLYARVAEAYSYAGGKKMVKYTEEQIFHLILEKYDGRKIALLAPVVRSRKGHYKEL
FERLRKKGYLHVRVDGEIREILHGMKLDRYKMHDVEVQIDKLCVASNQSKRIAESLALAM
REGEGLVMVLDSEKNEVGHFSRMMMCPDTGISYSDPAPHNFSFNSPHGYCPRCKGLGEVN
LPDMDKIIPSREKSIYEGGIEPLGKYKNNLFFWQIEALCEKYDVTIKTPLRDLPEELIED
ILYGTDELLTINNKALGQSRYALSFDGVAKYILMQAEESDASATAQKWADQFLKTTTCPD
CAGKRLNKEALSYRLAGKDIAEVNAMDIKTLIEWVDSLDEHLLDTQRAISIEILKEIRTR
LGFLKDVGLEYLTMNRAAASLSGGESQRIRLATQIGSKLVEVLYILDEPSIGLHQRDNLR
LIHSLQDLRDIGNTVVVVEHDQDMMLHADYVIDLGPRAGRHGGEVVFAGSPEEMVQANTL
TADYISGRKRIEKSIGRRDGSGKTIKLFGAKGNNLQNIDVIFPLGVFICVTGVSGSGKST
LINKTLFPAISQKLYRSLQDPMPYDRIEGLKHIDKIIAVDQSPIGRTLRSNAATYTGLFT
DIRALFVGLPESKARGYKPGRFSFNVKGGRCEVCKGNGYKTIEMNFLPDVFAPCEGCRGK
RYNRETLEVRYKGKSIADVLDMTINKAVEFFEHAPHILSKLSVLQEVGLGYIKLGQPSST
LSGGECQRVKLATELSKRDTGNTLYVLDEPTTGLHFEDVRVLLGILNRLIERGNTVIVIE
HNLDVIRCADYLIDIGPEGGAGGGQLLYQGKMEDIIECKNSYTAQFVKAELEKGRIDTVH
MNSADNI
NT seq 2904 nt   +upstreamnt  +downstreamnt
atgcacgatacagttataaacgtaaaagacaagatagctcgacacgatgctgtcgaagtc
tatggagcacgggtgcacaatctgaagaatatcgatgtgtgcattccgcgtcatagcctt
acagtcatcactggaatgagtggtagcggaaagtcgtcattggctttcgatacccttttt
gccgaaggacagcgacggtacatagaaactttttcggcttatgcgcggaatttcctcggt
ggtggtatggagcgccccgacgtggacgagataaaagggctgagtccggtcatttccata
gaacagaagacgaccaatcggaatccgagatcgactgtcggtaccgttacagaggtgtac
gacttctttcgtttgctctatgctcgtgttgctgaggcttattcttatgccggaggaaag
aagatggtgaaatacaccgaggagcaaatcttccacctcattttggaaaagtatgatggc
cgtaagatagctttgttagccccggtggttcgctcgcgtaaggggcattataaggagcta
ttcgaaaggcttcgtaagaaaggctatctgcacgtacgcgtggatggtgagattcgcgag
attttgcatgggatgaagcttgatcgctataaaatgcatgacgtcgaagtgcagatcgac
aagctgtgcgtagcatcgaatcaaagcaaacgtatagcggagagcttggcactggctatg
cgtgaaggcgaagggcttgtgatggtgttggattcggaaaaaaacgaagtgggacatttt
agtcggatgatgatgtgtcctgatacgggaatttcgtatagcgatccggctccgcacaat
ttcagtttcaattcccctcatggctattgtccgcgctgtaagggcttgggcgaagtgaat
ctgccggatatggacaagatcattccatctcgtgagaagagtatatacgaaggtggcatt
gagccattgggcaaatacaaaaacaatcttttcttttggcaaatagaggcattgtgcgag
aagtacgatgtgacgatcaaaacgcctttgcgcgatttgccggaagagttgatcgaggat
atcctatatggtacagacgaactactgaccataaacaacaaagctttggggcagtcgagg
tatgctctcagcttcgatggcgtggctaagtatatattgatgcaggcagaagaatcggat
gcttcggctactgcgcagaaatgggcagatcagtttctcaagactacaacttgccccgac
tgtgccggcaagcgtctgaacaaagaagctctgtcctatcgtttggccggcaaggacatt
gcagaagtgaatgcaatggacatcaagactcttattgaatgggtagattctctggatgaa
catctgttggatacgcaacgggctatttctatagaaatactgaaagagatacggacacgc
ttggggtttcttaaagatgtggggttggagtacttgacgatgaaccgagctgcagcatcc
ttatccggaggagaaagccagcgtattcgtttggctacgcagatcgggagcaaactggtt
gaggtcttgtacatattggatgaaccgagtatcggtcttcaccaaagggacaatcttcgg
ttgattcattcgcttcaggatttgcgtgatataggcaatacagtggtagtggtggagcat
gatcaggatatgatgctgcacgccgactatgtaatagacttaggaccacgagccggcaga
catggtggtgaagtggtgtttgcaggtagtccggaagagatggtgcaggctaataccctg
actgccgattatataagtggacgaaagcgtatagaaaagtcgatcggcaggagagatggt
agtgggaaaacgataaaattatttggagccaaaggcaataacctgcagaatatagacgtt
atctttccgctgggggtatttatatgtgttaccggggtctccggtagtgggaaaagtaca
ttgatcaataagactctattccctgctatcagccaaaagctgtaccgctctttgcaggat
ccgatgccctacgaccgcatagaggggttaaagcatatagataagataatagccgtagac
caaagtcctatcgggcggacgcttagaagcaatgcagccacatatacgggattgtttacc
gatattcgcgctctttttgtcggtctgcccgagagtaaagctcgtggatataagccgggg
cgtttttctttcaacgtcaaaggcggacgctgtgaggtttgtaagggtaatggctacaag
acgatcgaaatgaattttttgcccgatgtatttgctccgtgtgagggatgccggggaaag
cgatacaacagggagacactcgaagtccgttacaaaggaaaatccattgcggatgttttg
gatatgactatcaataaggctgtcgaatttttcgaacatgcacctcatattttatccaag
ctttccgttttacaggaggtcggtttgggctatatcaaactgggacaaccatcctcgact
ttgtcgggaggagagtgtcaacgtgttaaattagccaccgagctgagtaaacgtgacacg
ggaaatacactctatgtattagatgaaccgactacgggcttacatttcgaagatgtacgc
gttttgttggggatccttaatcgactgatagagagagggaatacggtaatagtgatcgaa
cataatttggatgtgatccgctgtgcggattatttgattgatataggaccggagggagga
gcaggtggcggacagttgctttaccaagggaaaatggaggatataatagaatgcaagaat
agttatacagctcaatttgtgaaagccgaactcgaaaaaggccggattgatactgtacac
atgaattctgcagacaatatataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (32)   

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