KEGG T02193: PGA2

Phaeobacter inhibens 2.10: PGA2_c00070

Entry

PGA2_c00070       CDS       T02193

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit GyrB

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

pgl Phaeobacter inhibens 2.10

Brite

KEGG Orthology (KO) [BR:pgl00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgl03032]
    PGA2_c00070 (gyrB)
   03400 DNA repair and recombination proteins [BR:pgl03400]
    PGA2_c00070 (gyrB)
Enzymes [BR:pgl01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PGA2_c00070 (gyrB)
DNA replication proteins [BR:pgl03032]
Prokaryotic type
  DNA Topoisomerases
   PGA2_c00070 (gyrB)
DNA repair and recombination proteins [BR:pgl03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PGA2_c00070 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim GyrB_hook GyrB_insert Toprim_4 HATPase_c_3 DUF1690

Other DBs

NCBI-ProteinID:

AFO86038

UniProt:

A0AA86D6Q5

Position

6165..8582

AA seq 805 aa
MSGNEQAPAEYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADRVVVKIHADSSVSVNDNGRGIPVGIHEEEGVSAAEVIMTQLHAGGKFDSNSYKVSGG
LHGVGVSVVNALSDWLELRIWRDGKEHVARFERGDTAEHLKVVGDCGDQTGTEVRFLAST
DTFSNLEYLFETLEKRLRELAFLNSGVRIILIDERPAERLEVELFYEGGVKEFVKYLDRS
KSPVMEAPIYITGDRDEIGVEVAMWWNDSYHETVLPFTNNIPQRDGGTHVAGFRGALTRT
INNYAQSSGIAKKEKVSFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPVVESL
VNEKLAEWFEENPNQAKQIVGKIIEAALAREAARKARELTRRKTAMDVNYLAGKLKDCSE
KDPSKTEVFLVEGDSAGGSAQTGRDRMTQAILPLRGKILNVERARFDRMLGSQEIGNLVM
ALGTGIGRDEFNIDKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQMPELIEGGYLYIAQP
PLYKVSRGKSEVYLKDQAALDEYLINQGVDGAVLKLGSGEELVGQDLARVVDEARQLKRV
LDAFPTHYPRHILEQAAVAGAFVPGAVDADLQGVADKVAQRLDLIALEYERGWRGRITQD
HGIRLSRILRGVEELRTLDGPMLRSGEARKTGSFTNSLQETYGATATLVRRDRSQAIHGP
LGLLKAILEEGEKGLALQRYKGLGEMNPDQLWETTLDPDARTLLQVRVEDMVEADDLFTK
LMGDVVEPRREFIQKNALSVENLDF

NT seq 2418 nt +upstreamnt +downstreamnt
atgtccggaaacgagcaggcccccgcagaatatggcgcggattccatcaaggttctcaaa
ggcttggaggcggttcgcaaacgccctggcatgtatatcggggacaccgacgatgggtcg
gggctgcaccatatggtgtatgaggttgtcgacaatggcatcgacgaggccctggccggt
cacgcggaccgggtggtcgtgaaaattcacgctgattccagcgtctcggtgaatgacaac
ggacgcgggattccggttggaattcatgaggaagaaggtgtctcagcagctgaggtcatc
atgacccagctgcatgcgggcggtaagttcgatagcaactcttacaaggtttccggtggt
ctgcacggcgtgggtgtgtccgttgtgaatgcgctgtcagattggctggaactgcgcatc
tggcgtgatggcaaggagcatgtcgcgcgatttgaacgtggcgatacggccgaacacctg
aaggttgttggcgactgtggcgatcagaccggtaccgaggtgcgctttctcgcctccact
gatacgttctccaatctcgaatatttattcgagacgctggaaaaacgcctgcgtgagctg
gcgttcctgaactcaggcgtgcggatcatcctgattgacgagcgcccggccgaacggctg
gaggtggagctgttctacgaaggcggcgtcaaggaattcgtcaaatatcttgatcggtcg
aagtcgcccgtgatggaggcgccgatctatatcaccggtgacagggatgagatcggggtt
gaggtggcgatgtggtggaacgacagctatcatgaaaccgtgctgccctttaccaataat
atcccgcagcgggatggtggcacccatgttgctggctttcgtggtgcgctgacccgtacc
atcaacaattatgcgcaatcttccggcatcgccaagaaggagaaggtttcctttaccggg
gatgacgcccgtgaggggctgacctgcgtattgtcggtcaaggtgcctgatccgaaattc
tccagccaaaccaaggacaaactggtctcctccgaggtgcgaccggtggtcgaaagcctg
gtcaacgaaaagctggcagaatggttcgaggaaaacccaaaccaggccaagcagatcgtc
ggcaagattatcgaagccgctctcgcgcgggaggctgcccgcaaggcgcgcgagctgacc
cgccgcaagacggcgatggatgtgaactatctggcaggcaaactgaaagactgctcggag
aaagatccatccaagaccgaagtcttcctggtggagggggactccgccggcggatccgcc
cagacgggccgcgaccggatgacccaagcgatcctgcctctgcgtggtaagattctgaac
gtggagcgtgcgcggtttgaccggatgctcggcagtcaggaaatcggcaacctagtgatg
gcacttggcaccggcattggtcgggatgagttcaacatcgataagctgcgctaccacaag
attgtcatcatgactgatgctgacgtcgacggcgcgcatatccgaaccctcttgctcacg
ttcttctatcgccagatgccggagctgatcgaaggcgggtatctctatatcgcacagccg
cccctgtataaggtgtcgcgcggcaaatcggaggtttacctcaaggatcaggccgctctt
gatgaatatctgatcaaccagggcgttgacggagcggtgctgaaactgggcagcggcgag
gaactggtcggccaggatcttgcccgtgttgtcgatgaggcgcgtcagctcaagcgtgtt
ctggacgccttccccacccattacccgcgccatattctggagcaggccgcagtagcgggt
gcctttgtgcccggcgccgtcgatgccgatctgcagggcgttgctgataaggtggcgcag
cgtctggatctgattgcgttggaatatgaacgcggttggcgtgggcgcatcactcaggat
cacggcattcgcctgtcgcggatcctgcgtggggtggaggagctgcgcaccttggacggt
ccgatgctgcgttccggcgaggcccggaaaactggcagctttaccaacagcttgcaggaa
acctatggggccactgcaacccttgtgcggcgcgaccgcagccaagcgattcacggccct
cttggcctgttgaaagccatcctcgaagagggtgaaaaaggtctggcgctccagcgttac
aaaggtctgggcgagatgaaccccgaccagctgtgggagacgacgctggaccctgatgcg
cgtaccctgttgcaggtccgtgtcgaagacatggtcgaggcggatgatctgttcaccaaa
ctgatgggcgatgttgtcgagcctcgccgtgaattcatccagaaaaacgcactgagcgtc
gagaacctggatttctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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