KEGG   Pedobacter ginsengisoli: CPT03_13060
Entry
CPT03_13060       CDS       T05145                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
pgs  Pedobacter ginsengisoli
Pathway
pgs00300  Lysine biosynthesis
pgs00550  Peptidoglycan biosynthesis
pgs01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pgs00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    CPT03_13060
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    CPT03_13060
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pgs01011]
    CPT03_13060
Enzymes [BR:pgs01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     CPT03_13060
Peptidoglycan biosynthesis and degradation proteins [BR:pgs01011]
 Precursor biosynthesis
  Amino acid ligase
   CPT03_13060
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase CbiA MobB
Other DBs
NCBI-ProteinID: ATP57337
UniProt: A0A2D1U6W6
Position
complement(3158326..3159783)
AA seq 485 aa
MQLQEVLYGVAITNLVGVTSREVSALVFDSRLVAKDVVFFAIKGTLSDGHAFIPATIEAG
ASVIVCEVIPAVRDEQVTYIEVENSAAALGIMASNFNGNPSAKLQLIGITGTNGKTTIAT
LLFKLFRELGYKVGLISTVENHINDQVIPATHTTPNPLALNSLLQDMVAADCSYCFMEVS
SHAVVQHRIEGLSFSGGVFSNITHDHLDFHVTFDNYIKAKKAFFDGLPKSAFALTNVDDK
NGMVMLQNTKASKKTYALKQLADFNAKVIENSFNGLHLDIDGADVFFKLVGSFNAYNLLA
VYGTAMLLEQDQLSVLTVLSRLTGAEGRFEYVVSPQNIIGIIDYAHTPDAVQNVLNTIQN
IRKGTEQVITVIGCGGDRDKAKRPVMAQVACDWSDKVILTSDNPRTENPQTIIEDMEKGV
SPTNKRKTLSIVDRKEAIKTACHLAKPGDIILLAGKGHEKYQEINGVRHHFDDKEVLVEQ
FNLIS
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgcagttgcaggaagttttatatggggtagcaataacaaacctggttggggtaaccagc
agggaggttagcgctttggtgtttgattcgcgtctggttgctaaggatgttgtgtttttt
gcaattaagggtactttgtctgacgggcatgcctttatccctgctactattgaagcaggc
gcaagtgttattgtttgcgaagtaatacctgcagttcgagatgagcaggtaacttatata
gaggttgaaaacagtgcggctgcgttggggattatggcttctaattttaatggaaatcct
tctgctaaactacagctaattggtattactggtaccaatggtaaaactactattgctact
ttattatttaaattattcagggagcttggttataaggttggtttgatctcgacagttgag
aatcatattaacgatcaggtgattcctgctacgcatactacgccaaatcctttggcttta
aatagtcttttacaggatatggtggctgccgattgtagctattgttttatggaggttagt
tctcatgcggtggtgcagcatagaattgaaggcctaagtttttcagggggggtgttttct
aatatcacacatgaccatttagattttcatgtaacctttgataattatattaaagcgaaa
aaggctttttttgacggcctgccaaaatcggcttttgcattaaccaatgttgatgataaa
aacggaatggtaatgctgcagaatactaaagcttcgaaaaaaacctatgcccttaaacag
cttgctgactttaacgctaaggttattgaaaacagctttaacggtttgcacctggatatt
gacggggccgatgtattttttaaactggtaggttcttttaatgcttacaatttacttgcg
gtatacggtactgctatgttgcttgaacaggatcagctttcggtacttacagtattaagt
aggttaacaggtgccgagggtaggtttgagtatgtggtttcgcctcagaatatcattgga
ataattgactacgcgcacactcctgatgctgttcagaatgttttgaataccatacagaat
ataagaaaaggtactgaacaggtgattacagtaattggctgtggcggcgacagggataaa
gctaaacgccctgtaatggcgcaggttgcttgcgactggagcgataaagtgattttaact
tcggataacccgagaacggaaaacccgcaaacgataatagaggatatggaaaagggtgtt
tcgccaacaaataaaagaaaaacattaagtatagtggacaggaaagaggcaattaaaact
gcctgtcatttggctaaacccggtgatattattttactggcaggtaaggggcatgaaaaa
tatcaggaaataaatggtgtaagacatcattttgatgataaagaggtattggtggaacaa
tttaatttgatcagctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system