KEGG   Porphyromonas gingivalis TDC60: PGTDC60_1114
Entry
PGTDC60_1114      CDS       T01516                                 
Name
(GenBank) RNA methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
pgt  Porphyromonas gingivalis TDC60
Brite
KEGG Orthology (KO) [BR:pgt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pgt03009]
    PGTDC60_1114
Enzymes [BR:pgt01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     PGTDC60_1114
Ribosome biogenesis [BR:pgt03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PGTDC60_1114
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 Met_10 TRAM Methyltransf_15 Methyltransf_25 MTS FtsJ N6_N4_Mtase N6_Mtase PCMT PrmA Methyltransf_11
Other DBs
NCBI-ProteinID: BAK25271
Position
complement(1156740..1158176)
AA seq 478 aa
MARKKKELPLITGVEITDLAAEGNALCRIDDMVMFVPFAAPGDRCTVQVVKKKRNFMQGR
IVSIESPSPIRKGPFCTHFTVCGGCKWQHIPYEIQLRAKEQQVTDALVRLGKVEVEEMQP
ILGSEQTEYYRNKLEFTFSNKRWLLPEEVQEVDGDFSPEVRYGLGFHIPGMFDKVLDIRE
CHLGAKVSDEIRLFIREYCMQDPERYPFFDLRNQEGLMRTLMIRTTSTGELMVVVVFFRN
DVAAREALLAAVAERFPQITSLLYVINTKCNDTIGDQEVLLYHGREYIEEEMEGLKFKIG
AKSFYQTNSRQAYQLYRIAREFAGLTGDELVYDLYTGTGTIANFVAGQAHRVIGIEYVPE
AIEDARTNSLLNGIENTLFYAGDMKDILTNDFIEQHGRPDVVITDPPRAGMHESVIDAIL
FAAPKRIVYVSCNPATQARDLALLMADGRYRAVKSRPVDMFPHTHHVENVVLLVRNTE
NT seq 1437 nt   +upstreamnt  +downstreamnt
ttggcaagaaagaaaaaagagcttcccctcattacaggggtggaaataacggatctggcg
gcagagggcaatgctctctgccgcattgatgatatggtgatgttcgtgcctttcgctgca
ccgggcgaccgttgcacggttcaggtggtaaagaaaaagcgcaacttcatgcaaggacga
atcgtctcgatcgaaagcccctcaccgatcaggaaaggacctttctgtacgcacttcacc
gtctgcggcggatgcaaatggcagcatattccatacgagatacagctccgagccaaggag
cagcaggtgaccgatgcactcgtgcgtctgggcaaggtggaggtggaggaaatgcagccg
atcctcggatcggagcagacggagtactaccgcaataagctcgaatttacattcagcaac
aaacgttggctactgcccgaagaggtacaggaagtcgatggcgacttctctcccgaggtg
cgatacggacttggattccatatccccggcatgttcgacaaggtattggacattcgcgaa
tgccacttgggggctaaggtatcggacgaaatacgtctcttcatccgcgaatattgcatg
caggatccggagcgttatcctttcttcgacctgagaaatcaggaaggcctgatgcgaacg
ctgatgatccggactacatccacaggagagctgatggtagtcgtggtcttctttcgcaac
gatgttgctgctcgagaagctctgcttgcggccgtagcggaacgtttccctcagatcacc
tcgctcctctacgtgatcaataccaagtgcaacgacacgataggcgatcaggaagtgctc
ctgtaccatggcagggaatacattgaggaggagatggaaggactgaagttcaagatcggg
gctaagtctttctaccagaccaatagccggcaggcctaccaactctatcggatagcgcgc
gaatttgccggtctcacaggggacgaactggtttacgacctctataccggcacggggacg
attgccaacttcgtagccggacaagcccatcgggtaatcggtatcgaatacgtacccgaa
gccattgaggatgcccgcacgaacagcctactgaatggaatagagaataccctcttctat
gcaggagatatgaaagacatcctgaccaacgacttcatcgaacagcatggacgtccggac
gtcgtcattacggatccgccccgagccggcatgcacgagagtgtgatcgatgccatcctc
tttgctgcacccaagaggatagtctatgtcagctgcaatcctgccacacaagcccgcgat
ttggctctgctgatggcagatggcagataccgagccgtaaaatcccgtccggtggatatg
tttccccacacccaccacgtagagaatgtggtactcctcgttcgaaataccgaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system