KEGG   Polymorphum gilvum: SL003B_2657
Entry
SL003B_2657       CDS       T01458                                 
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pgv  Polymorphum gilvum
Pathway
pgv03410  Base excision repair
pgv03430  Mismatch repair
pgv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pgv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SL003B_2657 (recJ)
   03430 Mismatch repair
    SL003B_2657 (recJ)
   03440 Homologous recombination
    SL003B_2657 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgv03400]
    SL003B_2657 (recJ)
DNA repair and recombination proteins [BR:pgv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     SL003B_2657 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     SL003B_2657 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SL003B_2657 (recJ)
SSDB
Motif
Pfam: DHHA1 RecJ_OB DHH ATPgrasp_N
Other DBs
NCBI-ProteinID: ADZ71080
UniProt: F2J4D8
Position
complement(2840054..2841862)
AA seq 602 aa
MSGPETARPVLGVTRSASGQVWRERQTPAQGLAALAIAQRLDLPDVLARVLAARDVTAAD
AEGFLDPTLKALMPDPSRLVDMDRAVARVADAVEAGTRIAIFGDYDVDGATSSAVLARYL
RRLGLDPAIHIPDRIIEGYGPNGPAIEALRAAGAGLLVTVDCGSTSFEAFDVARRLGLDV
VVIDHHQCGVELPAVSALVNPNRQDDLSGQGHLAAVGVTFLFLVGLNRELRRRGTFRRGG
EPDLLGLLDLVALGTVCDVVPLKGLNRAYVAKGLIAMHGRLNPGLASLADVARVGGKPAA
YHLGFLLGPRINAGGRIGDAALGARLLTCDDPQEARGLAETLDRLNAERQAMEAVMLEEG
DAQAVVQIDTHDPAVLVTGSPGWHPGIVGLIASRLKEAHRRPAFAIAYDETGKGTGSGRS
ISGVDLGRAVRRAVDEGLLEKGGGHAMAAGLTVRREREADLVAYFNETLKDDVEVASATR
ELKIDAALTAAGATLELMSLLDKAGPYGAGHPEPVFVFPAHRISYADVVGKGHVRATIAA
PDGSSLKGISFKAAERPHGEALLAARGRPMHVAGSLSVDTWQGAPRVQLRILDVADPQKS
RI
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgagcggaccggagaccgcccgtccggtcttgggcgtgacccgctccgcctccggccag
gtctggcgcgagcgccagacgccggcccagggcctcgccgctctcgccatcgcccagcgg
ctcgaccttcccgacgtgctcgcgcgcgtgctcgccgcgcgcgacgtcaccgctgccgac
gccgaaggcttcctcgatccgaccctcaaggccctgatgcccgatccgtcgcgcctggtc
gacatggaccgggccgtcgcccgcgtcgccgatgcggtcgaggccggtacgcggatcgcc
atcttcggcgactacgacgtcgacggcgccacctcttcggccgtgctggcgcgctacctg
cgccgcctcggcctcgacccggcgatccacatccccgaccgcatcatcgagggttacgga
cccaacggcccggccattgaggcgctgcgcgccgcaggcgccggcctgctggtcaccgtc
gactgcggcagcacctccttcgaggccttcgacgttgctcgccgtctcggcctcgacgtc
gtcgtcatcgaccaccaccagtgcggcgtcgaactgcccgccgtatccgccctggtcaat
ccgaaccgccaggacgacctgtcggggcaggggcatctggccgccgtcggcgtcaccttc
ctgttcctggtcggcctcaaccgcgaactgcgccggcgcggtacgttccggcgcggcggc
gagccggatctgcttggcctgctcgatctcgtcgcgctcggcacggtctgcgacgtggtg
ccgctcaagggcctcaaccgcgcctatgtcgccaagggcctgatcgccatgcacggtcgc
ctcaacccgggcctcgcaagcctcgccgacgtcgcccgcgtcggcggcaagccggccgcc
tatcacctcggcttcctgctcggcccgcgcatcaacgccggcgggcgcatcggcgacgcc
gccctcggcgcccgcctgctcacctgcgacgacccgcaggaggcgcgcggccttgccgag
accctcgaccggctcaacgccgagcgccaggcgatggaggcggtcatgctggaggagggc
gacgcccaggccgtggtccagatcgacacgcacgatccggccgtgctggtcaccggctcg
cccggctggcaccccggcattgtcggcctgatcgcctcgcggctgaaggaggcccaccgc
cggccggccttcgccatcgcctatgacgagaccggcaagggcaccggctcgggccggtct
atctccggcgtcgacctcggccgtgccgtgcgccgcgcggtcgacgagggtctgctggaa
aagggcggcggccacgccatggccgccggcctgaccgtgcgcagggagcgtgaggccgac
ctcgtcgcctacttcaacgagaccctgaaggacgacgtcgaagtggcgagcgcgactcgc
gaattgaagatcgacgcggccctgacggcggccggcgcgacgctcgagctgatgagcctg
ctcgacaaggccggcccctacggcgccggccatcccgagcccgtgttcgtgttcccggcg
catcgcatttcctatgccgacgtggtcggcaagggccatgtccgggccaccatcgccgcc
cccgacggctccagcctcaagggcatctcgttcaaggccgccgaacgcccgcacggcgag
gcgttgctcgccgcccgcggccggccgatgcacgtcgccggcagcctgtcggtcgatacc
tggcagggcgccccgcgcgtccagctgcgcatcctcgacgtcgccgatccgcagaagagc
cgcatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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