KEGG   Pseudonocardia sp. HH130630-07: AFB00_19215
Entry
AFB00_19215       CDS       T04486                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
phh  Pseudonocardia sp. HH130630-07
Brite
KEGG Orthology (KO) [BR:phh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phh03019]
    AFB00_19215
   03009 Ribosome biogenesis [BR:phh03009]
    AFB00_19215
Messenger RNA biogenesis [BR:phh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AFB00_19215
Ribosome biogenesis [BR:phh03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    AFB00_19215
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: ANY08067
UniProt: A0A1B1ZQN5
Position
complement(4035628..4036269)
AA seq 213 aa
MTDRLVWIDCEMTGLDLGSDALIEIAALVTDGDLNVLGEGVDVVIACDDAALDAMPDVVR
DMHARSGLAEEVRAATVTVAEAEQMVLAYIRAHVPDARTAPLAGNSIATDRGFLARDMTE
LDAYLHYRMIDVSSVKELARRWFPRVFYAKPEKGLAHRALSDIRESIRELAYYRKALFVA
PPGPSTEQAQAAAAAVADVAGPATAQVDGPAGG
NT seq 642 nt   +upstreamnt  +downstreamnt
atgaccgaccggctggtgtggatcgactgtgagatgaccgggctcgacctcggttccgat
gcgctcatcgagatcgcggccctggtcaccgacggtgatctcaacgtgctgggcgagggc
gtcgacgtcgtcatcgcctgcgacgacgcggcgctcgacgcgatgcccgacgtcgtgcgg
gacatgcacgcccgctccgggctggccgaggaggtccgcgccgcgacggtgaccgtcgcc
gaggccgagcagatggtgctggcctacatccgcgcccacgtcccggacgcccggacggct
ccgctggccggcaactcgatcgcgaccgaccgcggtttcctcgcccgcgacatgaccgaa
ctcgacgcctacctgcactaccggatgatcgacgtcagctcggtgaaggaactcgcccgg
cgctggttcccccgggtgttctacgcgaagccggagaagggactggcgcaccgcgcgctg
tccgacatccgggagtcgatccgcgaactggcgtactaccgcaaggcgttgttcgtcgcc
ccgcccggaccgagcaccgaacaggcgcaggcggccgcggccgccgtcgccgacgtggcc
gggccggcgacggcgcaggtcgacggccctgcgggaggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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