KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102114250
Entry
102114250         CDS       T02921                                 
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:phi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    102114250 (KDM2A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:phi03000]
    102114250 (KDM2A)
   04121 Ubiquitin system [BR:phi04121]
    102114250 (KDM2A)
   03036 Chromosome and associated proteins [BR:phi03036]
    102114250 (KDM2A)
Enzymes [BR:phi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     102114250 (KDM2A)
Transcription factors [BR:phi03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    102114250 (KDM2A)
Ubiquitin system [BR:phi04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     102114250 (KDM2A)
Chromosome and associated proteins [BR:phi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102114250 (KDM2A)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     102114250 (KDM2A)
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD F-box JmjC Cupin_8 LRR_4
Other DBs
NCBI-GeneID: 102114250
NCBI-ProteinID: XP_005528998
Position
Unknown
AA seq 1207 aa
MAAAAPVRGQRRRRDLEEEDDDSSPGVSFSLSSEESEMEPEEERIRYSQRLRGTMRRRYE
DDGISDDEIEGKRTFDLEEKLSTNKFNSTFVVFMEGKDFTVEYIQRGGLRDPLIFRNSDG
LGIKMPDPDFSVNDVRLCVGSRRMVDVMDVNTQRDIEMSMAQWARYYETPEEEREKLYNV
ISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMS
VKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
ECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLSMDMELSSSDSVNMEEEEEEEDDE
DAAGKESRRPMTRRSILTSPIANGANVDYDELSKSCRSSLPGLKKTPSIDSSDSSRGSQN
GQAWDPSGGSPRKSRKVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKL
LLEEYANSDPKLALTGVPIVQWPKRDKLKLQARLRVRLPTIPITKPHTMKPAPRPTPVRS
TVSPIVSGARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLP
HSVTCALCGEVDQNEDSQDFEKKLMECCICNEIVHPGCLQMDGEGLLNDELPNCWECPKC
YQGDDAEKGQKRKVEESDDDTAQAKVLRPLRSCEEPLTPPPNSPTPMLQLIHDPASPRGV
VTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNPSGKKELSEVEKAKLH
GSYLTVTLQRPTKDVHGTSIVPKLQAITASSANLQHSPRVVVRHAPARMPLRSGGDEEAA
AEEEEEEEEEEEENAEEGGAARLNGRGGRAQEGEESCVQREVWMSVFRYLTRRELCECMR
VCKTWYKWCCDKRLWTKIDLSRCKSITPQALSGIIKRQPVSLDLSWTNISKKQLTWLVNR
LPGLKDLILAGCSWSAVCALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPSQDNR
SKLRNMIDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQSANLLTAVGSSTRNS
LTELNMAGCNKLTDQALLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDE
KLIQKIS
NT seq 3624 nt   +upstreamnt  +downstreamnt
atggcggcggcggctcctgtaagaggacaaaggcgcaggagagacctggaggaagaggac
gacgacagcagtcctggcgtgtccttctcactctcttcagaggagtcggagatggagcct
gaggaagaacggatccgttacagccaaagactgcgtggcacgatgaggcgacgttacgag
gacgatggcatctccgacgatgagattgaagggaagaggacgtttgaccttgaggaaaag
ctgtccaccaacaaattcaactccacttttgtggtcttcatggaaggcaaagacttcaca
gttgagtacatccagcgaggtggcctgagggacccactcatcttcaggaactcggatggc
ctggggataaagatgccggatccagacttcagcgtgaacgatgtgcggctgtgtgtgggg
agccgacggatggtggatgtgatggacgtgaacacgcagcgagacatcgagatgtccatg
gcgcagtgggcgcgctactacgaaacaccagaggaggagcgggagaagctctacaatgtc
atcagcctggagttcagccacaccaaactggagaatctggtgcagagacctgctacggtg
gatttgattgactgggttgataacatgtggcccaggcacctgaaggaaagtcagacagag
tctaccaatgccatcctggagatgcagtatccaaaggtgcagaaatactgtttgatgagc
gtcaagggctgctatacagatttccacgtggactttggtggcacatctgtgtggtaccac
atccaccgagggggaaagatcttctggctgatccctcccacaccccagaacctggagctc
tatgaaaactggcttctctcagggaagcagggagacatcttccttggggacagagtgtca
gagtgccagcgcatcgagctcaagcagggctacacatttgtcatcccctcaggttggatc
catgctgtgtacactcccatggacacgctggtttttgggggcaacttcttacacagcttc
aacatccctatgcagctccggatctacagcattgaggatcgcacacgggtcccaaataaa
tttcgttatcccttctattacgagatgtgttggtatgtgctggagcgctacgtgtactgc
atcaccagccgctcccacctgaccaaggacttccagaaggaatccctgagcatggatatg
gagctgagctcctcagactctgtgaacatggaagaggaggaggaagaggaggatgatgag
gatgcagcagggaaggaatcccggcgccccatgaccaggaggtccattctcaccagcccc
atcgccaatggtgccaatgtggactatgacgaactgagcaagagctgccggagcagcctg
ccaggtctcaagaagaccccatccatagactcttctgactccagccggggctcccaaaat
ggccaggcgtgggacccgagtgggggcagcccccggaagagcaggaaggtgcacctgacc
cagtttgagctggaggggctgcgctgcctcgtggacaagctggagtcactccctctgcac
aagaagtgtgttcccaccggcatcgaggatgaggacgccctcatcgctgacgtcaagctg
ctgttggaagaatacgcaaacagcgatcccaaactggcacttacaggcgtccccatcgtc
cagtggcccaagagagataagctaaagctccaggcccggctgcgggtgcgcctgcccacc
atccccatcaccaagccgcacaccatgaagccagcaccacgcccaactcccgtcaggtcc
acggtgtctcccatcgtgtcgggtgcccggcggaggcgggtgcggtgccggaaatgcaag
gcctgcatgcagggcgagtgtggcatgtgccactactgcagggacatgaagaagtttggc
gggcctggccgcatgaagcagtcttgtgtcctccggcagtgcttggcgcccaggctgcct
cactcggtcacgtgtgcactttgtggggaggtggatcagaatgaggactcgcaggacttt
gagaagaagctcatggagtgctgtatctgcaatgagatcgttcaccctggctgtctgcag
atggatggggaaggactgctcaatgacgagctccccaactgctgggagtgccctaagtgc
taccagggtgacgatgcagagaagggccagaagcgtaaggtggaggagagcgacgacgac
acggcgcaagccaaggtgctgcggcccctgcggagctgcgaggagcccctgacccccccg
cccaactcgcccaccccgatgctgcagctgatccacgaccccgcgtccccccgcggggtg
gtgacacgctcgtccccgggggccgggcccagcgaccaccacagcgccagccgggacgag
cgtttcaagcgccggcagctgctgcggctccaggccacggagagaaccatggtgcgggag
aaggagaacaaccccagtggcaagaaggagctgtcagaggtggagaaggccaagctgcac
ggttcctacctcaccgtgacgctccagcgccccaccaaagatgtccacggcacttcgatc
gtccccaagctccaagccatcacggcctcctcggccaacctgcagcactcgccgcgcgtg
gtcgtgcgccacgcgcccgccaggatgcccctgcggagcgggggcgacgaggaggcggcc
gctgaggaagaggaggaggaagaggaggaggaggaggagaatgcggaggaggggggggcg
gcccggctgaacgggcgcgggggccgggcgcaggagggcgaggagagctgtgtccagcgt
gaggtctggatgtccgtgttccgctacctcacccgcagggagctctgcgagtgcatgcgg
gtgtgcaagacctggtacaagtggtgctgtgacaagagattgtggacaaagatagacttg
agcaggtgcaagtccatcaccccccaggcgctgagcggcataatcaaaaggcagccggtc
agcctcgacctcagctggaccaatatctcaaaaaaacagcttacgtggctcgtcaacagg
ctgccaggcctgaaagacctcatcctagcgggctgttcctggtctgcggtctgtgctctc
agtacctccagctgcccccttctcaggaccctcgatcttcggtgggcagtaggaatcaag
gaccctcagatccgggacttactcacacctccaacagacaaacccagtcaggacaatcgc
agcaaactccgcaacatgatcgacttccggctcgccgggctggacatcacggacgccacg
ctgcgcctgatcatccgccatatgcccctgctctcccgcctcgacctcagccactgcaac
cacctcacggaccagtcggccaacctcctcaccgccgtgggctcctccacacgcaactcc
ctcaccgagctcaacatggcaggctgcaataagctgacggaccaggccttgctctacctg
cgccgcatctccaacgtcaccctcatcgacctgcggggttgcaagcagatcacccgcaaa
gcctgtgagcacttcatctcggacctgtccatcaacagcctctactgcctgtccgatgag
aagttgatccaaaaaatcagctag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (54)   

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