KEGG   Pyrococcus horikoshii: PH1875
Entry
PH1875            CDS       T00014                                 
Symbol
PH1875
Name
(GenBank) 432aa long hypothetical protein
  KO
K15865  threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
Organism
pho  Pyrococcus horikoshii
Brite
KEGG Orthology (KO) [BR:pho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pho03016]
    PH1875 (PH1875)
Enzymes [BR:pho01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     PH1875 (PH1875)
Transfer RNA biogenesis [BR:pho03016]
 Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    PH1875 (PH1875)
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM
Other DBs
NCBI-ProteinID: BAA30997
UniProt: O59545
Position
1631166..1632464
AA seq 432 aa
MRGVYRVMVKVYIENYGCARNRADGEIMAALLYLSGHEIVESPEESEIVVVNSCAVKDPT
ERKIARRIRELLDNGKKVIVTGCLPHVNPDVIDERVSAILGVKSIDRIVQAVEYAMRGEK
LISVPDWKKRNLDKLDFPRLSPRNVYFILPIAEGCLNACTYCATRLARGVLKSYSPEKII
GWVKWAIKQGYKEIWLSAEDTGCYGFDIGTNLAKLIDEITAIEGEFRIRVGMMNPNHVLK
FLDELIDAYKDEKVYKFLHLPVQSGDNEILRKMGRMYTVEEFEEIVKAFRREFPELNLHT
DIIVGFPGESEEAFQRSVELIKRIRPDKVNVSRYSPRPGTIAAKWKQLPGWVVKERSRLL
HRIRLQISYEINRKYIGKKVKVLIHGEGKKGNVDAVTMNYKHIILPEGRKGEFREARVKN
AASTYLLGEIIT
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgcgaggagtgtatcgagtgatggtcaaggtctacattgaaaattacggttgcgcaaga
aatagggccgatggagagataatggcggccctactttacctatccggccacgagatagtt
gagagtccagaggagagtgagattgttgttgtaaatagttgtgcagtaaaagacccgaca
gagaggaagatagcgagaaggattagggaattacttgacaatgggaaaaaggtcatagtt
actggttgccttccacacgttaatccagacgttatagatgaaagggtttcagcaatttta
ggcgttaaaagcatagataggatagttcaggccgttgaatatgctatgagaggggaaaaa
ctaatctctgttccagattggaaaaagagaaaccttgataaattagattttcccagactg
tcccccaggaatgtatacttcatactccccatagccgaagggtgtctgaatgcatgtaca
tattgtgccacgcggctagctagaggggtcttaaagagttactccccagagaaaatcatt
ggatgggtaaaatgggccattaagcagggatacaaggagatctggttatccgcagaagat
acgggatgttatggttttgacattgggaccaatttagcgaaactaattgatgagataact
gctatagagggtgaatttaggataagagttgggatgatgaatcctaatcatgttctcaaa
tttttagatgaacttatagatgcctacaaagatgagaaagtgtataagtttcttcaccta
ccagttcaaagtggggacaacgagatacttaggaaaatgggaaggatgtatacggttgaa
gagtttgaagagatagttaaagcatttaggagggaatttccagaattaaatcttcacact
gacataatagttggatttccgggtgagagcgaggaagcgtttcaaagaagtgttgagctc
ataaagaggataagacctgacaaagttaacgtttctagatactcccccaggccgggaaca
atagcagcaaagtggaaacagctacctggttgggtagttaaagagagatcgagactctta
catagaatcagactacagataagttacgagataaacagaaaatacataggtaagaaagtc
aaagtcctcattcatggagaggggaaaaaaggaaatgtggatgccgtaactatgaactac
aagcacataatcctaccggaaggtagaaaaggtgaatttagagaagctagagttaaaaac
gcagcctcaacctatctactcggcgaaattatcacgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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