KEGG   Phaeobacter porticola: PhaeoP97_01327
Entry
PhaeoP97_01327    CDS       T04595                                 
Name
(GenBank) putative ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
php  Phaeobacter porticola
Brite
KEGG Orthology (KO) [BR:php00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:php03016]
    PhaeoP97_01327
Enzymes [BR:php01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     PhaeoP97_01327
Transfer RNA biogenesis [BR:php03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    PhaeoP97_01327
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: APG46750
UniProt: A0A1L3I3P2
Position
1341242..1342399
AA seq 385 aa
MKTLTSTEELQAFCEAAAQHPYVTVDTEFLRERTYYSKLCLVQLAYPGKENENAVLVDPL
ADGLSMEPLYTLFRNENVVKVFHAARQDLEIFWVEAQVFPTPLFDTQVAAMVCGFGEQVG
YETLVRKIVKQGVDKTSRFTDWSRRPLSDAQKTYALADVTHLRQIYEHLAAELKRTDRSH
WVAEELQVLTDPATYDVDPQEAWRRVKTRTNSGKFLAVVRELAAFRETYAKTNNVPRNRV
FKDDALVELASTKPRSGSDLGNSRLLLREARRGTIAEGILEAVTRGINCPAGSQPQPDRS
REKLQVNPALADLLRVLLKAKTEASGVAAKLIAPSSDLDAIAAGQRDVPALNGWRHEVFG
ADALRLCNGEIALAAKGQDVKVVTL
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgaaaactcttacctctaccgaagaactacaggccttctgcgaagcggcagcacagcac
ccttatgtgacggtggacactgagtttttgcgagaacggacctactactcgaaactttgc
cttgtgcagcttgcctatcccggcaaggaaaacgagaacgcagttctggttgatccgctg
gccgacggcttgtcgatggagccactttatacactttttcgcaatgagaacgtggtcaaa
gtcttccatgcggcacgtcaggatctggaaatcttctgggttgaggctcaggtttttcca
acgcctttgttcgatacacaggtcgcagccatggtctgtggttttggtgagcaggtcggt
tacgaaacgctggtgcgtaagatcgtcaaacaaggtgtggacaaaacctcgcgctttacc
gattggtcacgccgcccactgagcgatgctcaaaaaacctatgccctcgctgatgttact
catttgcgtcagatctacgaacatctcgcggcggagctaaaacgtacagatcggtcccat
tgggtcgccgaagaactgcaggtgctgaccgatccggcaacctatgatgttgatccgcaa
gaggcctggcgccgggttaagacccgcaccaattctggcaagtttctcgctgtggtccgt
gaactggcggcgtttcgtgaaacctacgccaaaacaaacaatgtgccgcggaacagggtg
ttcaaagatgatgcactggttgagcttgcctcgaccaagccacgttcgggctcggatctg
ggcaactcccgtctgctgctgcgcgaagcccgccggggtaccatcgccgagggcatcctt
gaggccgttacacgcggcatcaattgcccggccggatcacagccccagcctgaccgtagc
cgtgaaaagcttcaggtgaatcccgctctggctgatttgctgagagttcttttgaaggcc
aagaccgaagcctccggcgttgcggcaaaattgatcgcccccagctcagatctggacgcg
attgcagccgggcagcgggacgtgccagccttgaatggttggcgtcacgaggtctttggt
gctgatgcactgcgcctttgcaatggtgagattgcgctcgctgccaaaggtcaggacgta
aaggtcgtaacgctctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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