KEGG   Paraburkholderia hospita: C2L64_10190
Entry
C2L64_10190       CDS       T05305                                 
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
phs  Paraburkholderia hospita
Pathway
phs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:phs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    C2L64_10190 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phs03400]
    C2L64_10190 (recD)
Enzymes [BR:phs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     C2L64_10190 (recD)
DNA repair and recombination proteins [BR:phs03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     C2L64_10190 (recD)
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 AAA_11 UvrD-helicase SH3_13 Helicase_RecD Viral_helicase1 SLFN-g3_helicase RecD_N DEAD AAA_22 T2SSE Flavi_DEAD CbiA MukB AAA_25
Other DBs
NCBI-ProteinID: AUT68648
UniProt: A0A1H6PEG2
Position
1:complement(2241581..2243590)
AA seq 669 aa
MSTFDQPLPDVEVNVPAPADFSTALAEGFARRVSALAQRGGASADAVRWAARGAFAASRA
TSEGHVCVPLDELAKRYDAEVAQVRDALLASGVASDGVQPAHALRPLVVDGQGRLYLARY
YDYERRLAQSLVGHARGADQDAVSAEMSSQGLRDRLLRYFGEPQDDQIDWQRVAAVMALS
GRLTIVSGGPGTGKTTTVVGVLACLLDARADLRIALAAPTGKAAQRMQEALLARASSLPQ
ELAARLPQTSFTLHRLLGTGPNGRFRHHRDNPLPYDVIVIDEASMIDVAMATHLFDALAP
DTHLVMLGDKDQLAAVEAGAVFAELSAQPAFTAKGVGSIATALGIDERRLRDALPTGRDD
APSEETRPFFDDLFGMPSEVLSSSDETQPAPLADCVVWLERNYRFGLESAIGRLSLAIRR
GAAQEALDVLHIDPAKPCAAAFHEDTDAAPAERTIQRLAAGFAPYADALAAALSDGAAGA
ASHALALFDALNRFRILCATRLGSRGVEQMNTAMAAQVRRIARVPLAVGAQWFAGRPIMV
TRNDYALGLFNGDIGIALPGADGALRVFFRSADGSLRAVSPAALPPHDTAFALTVHKSQG
SEFEHAVLMLPSTFSRVLSRELVYTAVTRARERVEVVGSRAVLMRAIATPTQRDSGLAAR
IVEAMRDDV
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgagcacgttcgatcagccgttgcccgatgtcgaggtcaatgtccccgcgcccgcggat
ttcagcacggcgctcgccgaaggcttcgcgcggcgcgtgagcgcgcttgcgcaacgtggc
ggcgcatccgcagacgccgtgcgctgggccgcgcgcggcgcgtttgcggcgagccgcgcg
acatcggaaggacacgtgtgcgtgccgctcgacgaactcgcgaagcgctacgacgccgag
gtcgcgcaagtgcgtgacgcattactcgcgagcggtgtcgcaagcgacggcgtgcagccg
gcgcatgcgttgcgcccgctcgtcgtcgatgggcaagggcggctttatctcgcgcgttac
tacgattatgaaagacggcttgcgcagtcgctcgtcggacacgcacgaggcgcggatcaa
gatgccgtgtcggcggagatgtcatctcaaggtttgcgcgacaggctgctgcgttatttc
ggcgaaccgcaggacgatcagatcgactggcagcgcgtggctgccgtgatggcgctgtcc
gggcggctgacgatcgtcagcggcggtccgggcacgggcaagacgacgaccgtcgttggc
gtgctcgcctgtctgctggatgcgcgcgcggacttgcgcatcgcgctcgccgcgccaacg
ggcaaggccgcgcaacggatgcaggaggcgctgctcgcgcgcgccagttcgttgccgcag
gaactcgcggcgcgtttgccgcaaacctcgttcacgttgcatcggttgttgggcaccggg
ccgaacgggcgcttccgtcatcatcgggacaacccgctgccgtatgacgtgatcgtgatc
gacgaggcgtcgatgatcgacgtcgcgatggcgacgcatctgttcgatgcgctcgcacct
gacacgcatctcgtgatgctcggcgacaaggatcaactcgcggccgtcgaagcgggcgcc
gtgttcgccgagttgagcgcgcaacctgcgttcacggccaagggcgtcggctcgatcgcg
acggcactgggaatcgatgaacgccgtttgcgtgacgcgttgcccacgggccgtgacgat
gcgccgtcggaagaaacccggccgtttttcgacgacctgttcggcatgccgtccgaggtg
ttgtcttcatcggatgagacgcagccggcgccgctcgccgactgcgtcgtatggctcgaa
cgtaactatcgcttcgggctggagtcggcgatcggccggctgtcgctcgcgatccggcgc
ggcgccgcgcaggaagcgctcgacgtactgcatatcgatcccgccaaaccctgcgccgcg
gcgtttcacgaagacaccgatgccgcgcccgccgaacgcacgatccagcggctcgcggcc
ggtttcgcgccctacgcggacgcgctcgcggcggcgctctccgacggtgcagcaggcgcg
gcctcgcacgcgttggcgctgttcgacgcgctcaatcgcttccgcatcctgtgcgcgacg
cgactcggctcgcgcggcgtcgagcagatgaatacagcgatggccgcgcaggttcgccgc
atcgcgcgcgtgccgctggccgtcggcgcgcaatggttcgcgggccgaccaatcatggtc
acgcgcaacgactatgcgctgggtctgttcaatggcgatatcggtatcgcactgccgggc
gcggacggcgcgctgcgcgtgttcttccgtagcgcggacggcagcctgcgcgcggtgtcg
cccgcggcgctgccgccgcacgacacggccttcgcgctcacggtgcacaagtcgcaaggc
tcggagttcgaacacgcggtgctgatgctgccgtcgacgttcagccgggtgctgtcgcgc
gaactcgtctatacggccgtcacgcgggcgcgcgagcgggtcgaggtggtcggctcgcgg
gccgtgctgatgcgcgcgatcgcaacgccgacgcagcgcgactccgggcttgccgcgcga
atcgtcgaagcgatgcgggatgacgtgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (27)   

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