KEGG   Phyllobacterium zundukense: BLM14_06915
Entry
BLM14_06915       CDS       T05167                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
pht  Phyllobacterium zundukense
Pathway
pht03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pht00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BLM14_06915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pht03019]
    BLM14_06915
Enzymes [BR:pht01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BLM14_06915
Messenger RNA biogenesis [BR:pht03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BLM14_06915
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UTP25 AAA_22
Other DBs
NCBI-ProteinID: ATU93712
UniProt: A0A2N9VW81
Position
1430101..1431441
AA seq 446 aa
MGLNAILLKAVEAAGMATPKPIQAQAIPAQLSGQDILGIAQTGSGKTAAFALPILQKIIT
IGDKRKGKTARALVLAPTRELAVQIEETFRTLAKGAHISTALVLGGVSRIAQINKMQAGV
DVLIATPGRLTDLVRDNRIDLSETRWLVLDEADRMLDMGFINDVKRIAKGTHRDRQTALF
SATMPQEVATLAATLLRNPVRVEVAPQGTTAAEIKQVVHMIPTKQKKQVLSAMLKDETLA
SVIVFTRTKHGADAVTRVLEKDGYDVAAIHGNKSQNARQRALNGFKDGSVRVLVATDIAA
RGIDVVGISHVINFDLPDEPESYVHRIGRTGRNGASGSAITLYDPAEESSKLKAVERVTR
MRLPMHDSPIDLSSLPARAANTDQRPPRREGGSGAPGKKPHRGQSAGAGKPREARGEKIW
SNDGGAPAQKRPFRRNKRKSFGAKAA
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgggtctgaatgccatcctgctgaaagcagtcgaggcagctggaatggctactcccaag
ccgatccaggcacaggcgatcccggcccagctctcaggccaggacattctcggcatcgcc
cagacgggctctggcaagacagcagcttttgctctgcccatcctgcagaaaatcatcacc
atcggtgacaagcgcaaaggcaagactgctcgcgcgctggtccttgctccaacccgcgaa
cttgccgtgcagatcgaagagacgttccgtaccttggcgaaaggcgcgcatatctcgacc
gctctcgtccttggcggcgtctcgcgtattgcgcagatcaataaaatgcaggccggcgtc
gatgtcctgatcgccacccccggtcgcttgactgaccttgttcgtgacaaccgcatcgat
ctctccgagacgcgctggcttgtgctcgacgaggccgaccgcatgctcgatatgggcttc
atcaacgacgtgaagcgtattgccaagggcacgcatcgcgatcgtcagaccgcactgttc
tccgcgacgatgccccaggaagtggccacgctggccgccaccctgttgcgtaatccggtt
cgtgttgaagttgcgccacagggcacgacggctgccgagatcaagcaggtcgtgcatatg
atcccaaccaagcagaagaagcaggttctttctgccatgctcaaggatgaaaccttggct
tcggtcatcgtcttcacccgtaccaagcatggtgccgatgcggttacacgtgttcttgag
aaggacggctacgatgttgcggccattcacggcaacaagtcgcagaatgcacgtcagcgc
gcgctgaatggcttcaaggatggttccgttcgtgttctcgtcgccaccgatattgcagca
cgtggtatcgatgtcgttggtatcagccacgtgatcaatttcgacctgccggacgaaccg
gagagctatgttcaccgcatcggccggaccggtcgtaacggcgcatcgggctcggcaatc
actttgtacgatccggcagaagaaagttcaaaactgaaggcggttgaacgcgttacgcgc
atgcgtcttccgatgcacgattcgccaatcgatctgtcgagcttgccggctcgtgccgcc
aataccgatcagcgtccaccacgccgcgaaggtggtagtggtgcacccggcaagaagccg
catcgcggtcagtctgccggtgccggtaagccgcgcgaagcgcgcggtgaaaagatctgg
agcaatgatggcggcgccccggcgcaaaagcgtccgttccgccgcaacaagcgcaagagc
tttggtgcaaaagcggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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