KEGG   Pangasianodon hypophthalmus (striped catfish): 113536370
Entry
113536370         CDS       T05759                                 
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113536370 (exosc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phyp03019]
    113536370 (exosc6)
Messenger RNA biogenesis [BR:phyp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     113536370 (exosc6)
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 113536370
NCBI-ProteinID: XP_026786047
Position
Unknown
AA seq 316 aa
MLPRAQLSTPGRDRAGRNRGMQPAVQLAASSVRVRSRSGPVHPNSQPALHHTERALQVKA
LIPKKCRAQXSSTSSRRQSARGDGDARPVFARCGLVSQAKGSAYLEAGNTKIICSVYGPR
ETERKDETDMKSGRLVCDFRLAPFSCPKRGAWIQSAEERDLSAALAESLQPGACLHRYPR
AQVDVNVVVLENDGSVLAHAVTCASMALADAGIEMYDTVLGCALRQDGDRCLVDPDLAEE
QGGARGSCGENQGRVAVALLPNLNQISGLRADGEMREDTLTAAVRTCVEGCHKLYPVVQQ
AILRAVKRKAPPPPEK
NT seq 951 nt   +upstreamnt  +downstreamnt
atgctgcctcgcgctcagctctccacaccgggacgggacagggcggggaggaatcgggga
atgcaaccggcagtgcagctggcagcgagcagtgtgcgcgtgcggagtcggtccggtccg
gtccaccccaacagccaaccggctcttcatcatacagagcgcgcgctccaggttaaggca
cttataccaaaaaaatgtcgcgctcagannagcagcaccagcagcaggaggcagagcgcg
cgaggagacggtgatgctcgcccggtgttcgcgcgctgcggtctcgtgagccaggctaag
ggttctgcgtacctcgaggccgggaacacgaagatcatctgctcggtgtacggtccgcgc
gaaacggagcgcaaggacgagaccgacatgaaaagcggccggctcgtgtgcgacttccgc
ctggcgccgttttcctgcccgaagcgcggcgcgtggatccagagcgccgaggagcgcgac
ctgtccgcggcgctggcggagagcctgcagcccggcgcgtgcctgcaccgctacccgcgc
gcgcaggtcgacgtgaacgtcgtggtgctggagaacgacggctccgtcctggcgcacgcg
gtgacctgcgcgtccatggcgctcgcggacgccgggatcgagatgtacgacacggtgctg
ggctgcgcgctgaggcaggacggagaccggtgcctcgtggacccggacctggcggaggag
cagggcggcgcgcgcgggagctgcggagaaaaccagggacgcgtcgcggtggcgcttctc
cccaacctgaaccagatttccgggctgcgcgcggacggcgagatgcgcgaggacacgtta
acggcggctgtgagaacgtgcgtggagggctgccacaagctgtacccggtggtgcaacaa
gccatactgcgggctgtgaaaagaaaagcaccacctccacctgaaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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