KEGG   Scheffersomyces stipitis: PICST_58961
Entry
PICST_58961       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K14764  protein SHQ1
Organism
pic  Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:pic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pic03009]
    PICST_58961
Ribosome biogenesis [BR:pic03009]
 Eukaryotic type
  Sno RNPs
   Box H/ACA snoRNPs
    PICST_58961
SSDB
Motif
Pfam: SHQ1 SHQ1-like_CS PIH1_CS
Other DBs
NCBI-GeneID: 4838986
NCBI-ProteinID: XP_001384030
JGI: 58961
UniProt: A3LT39
Position
4:392645..394204
AA seq 502 aa
MITPFFSIRQDDEFVYIDVKISHVRFSAQGIEMIVDNELFIFSLSPYYLRLRLPYACVDD
ERSHAEYNSKDEAVNIKIPKETKGQFFPDLDLTTKLLARTAESQPLDENELKEPLIEELD
VNNDISSTKTQQLEQDIAEGEKFNWEISQEAATDPAINTDDSIKMAAIKYGFNNQYNAIV
GVSVSNGNDINELGDPENTPATDRIIERLIKENIKFDPEFYAADYIMEKYPSPDDEKSFK
ELLEWKNPLVRQFLKWYKAQQQLPLAERTQVMPVQFSKEEQEKMINLPRKSYLVEEVFRP
QLYTLLVSLLFSYHFDLRETEGEHNIESAWTIGRLTPQIAYLDSQILVPTGNESILRAAV
ITGIRRALSYPLHRNYNLTVKVWEDVYYNLRGGKRLVLKALLDLKELFRYHDVYYVYDKI
WLEDFCSWLISDDVTEATLRTLAHDLKMEYTGLQKTDITFEKLDTEASQEDGEEDKEDII
ALNLHDIEVMAENSFQAFQNNL
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgataactccattctttagtatcaggcaggacgacgaattcgtctatattgatgttaag
atttcccatgtcagattcagtgcccagggcattgagatgatcgtagacaatgagcttttc
atcttttcgctcagcccctactatttgaggttgagacttccctatgcctgtgttgacgat
gagagatcacatgctgaatataacctgaaggacgaagcagtaaatatcaaaattcccaaa
gagacaaaaggacaattctttcctgacttggacttgaccacgaaactcttagcaagaact
gctgagagccagccacttgatgaaaacgaattgaaagagcctttaatcgaagaacttgat
gtgaataacgatatatcctctacaaaaacgcagcagttagaacaggatatagctgaaggg
gaaaagttcaactgggagatatctcaggaagctgctactgatccggccataaacactgat
gacagtatcaagatggcggctatcaagtacggtttcaataatcaatacaatgccattgtt
ggagtgtctgtttctaacggaaatgatatcaacgagttgggtgatccagaaaacactcct
gctacagatagaataatagagagattgatcaaggagaacatcaagtttgatcccgagttc
tatgctgctgactacatcatggagaagtaccccagccctgatgatgagaagtctttcaag
gagctcttggaatggaagaatcccttggtgaggcaattcttgaaatggtacaaggctcag
cagcaattgcctttagccgaaagaacgcaggtaatgcccgtacaattctctaaagaagaa
caggaaaagatgataaaccttcctcgtaagtcatatcttgtagaagaggtgtttagacca
caactctacacgcttcttgtctcgttgttgttttcgtatcatttcgatttgagagagact
gaaggcgaacacaatatagaaagtgcatggaccataggcagattgactccacaaatagca
tacttggattcgcagattcttgttcctactggaaatgagagtatattgcgcgctgccgtc
ataactggtataagaagagccctctcttatcctttgcatagaaactacaatttgaccgtc
aaggtttgggaagatgtgtattataatctcagagggggaaaaagattggtgttgaaggca
ttgttagacttgaaggagttgttcagatatcatgatgtctactatgtgtatgataagata
tggctcgaagacttctgttcgtggttgatcagtgacgatgttaccgaggctacacttcgt
acattagctcatgacttaaagatggagtacaccggcttacagaagactgatatcaccttc
gagaaattggatactgaagcctctcaagaagatggagaggaagacaaggaggacataatt
gccttgaatcttcacgacatagaagtcatggctgagaacctgttccaggctttccagaat
aacttatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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