KEGG   Scheffersomyces stipitis: PICST_64920
Entry
PICST_64920       CDS       T01023                                 
Name
(RefSeq) ubiquitin-protein ligase E3 component N-recognin-1 (N-end-recognizing protein)
  KO
K10625  E3 ubiquitin-protein ligase UBR1 [EC:2.3.2.27]
Organism
pic  Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:pic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pic04121]
    PICST_64920
Enzymes [BR:pic01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     PICST_64920
Ubiquitin system [BR:pic04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   UBR box proteins
    PICST_64920
SSDB
Motif
Pfam: PRT6_C zf-UBR ClpS zf-C3HC4 DUF2113 DUF998
Other DBs
NCBI-GeneID: 4851407
NCBI-ProteinID: XP_001387973
JGI: 64920
UniProt: A3GGK8
Position
1:complement(1738845..1744354)
AA seq 1802 aa
MSVDELKQFLVGLPAALDYIVPSGVNHNVFRALYYCATNKGQCLSTILPSVPLPEIEKIQ
LQGLNFAFSLSDENKLFYRNSRRSASNASHYSHPRGKVCARSFRSKEPVYRCEECGFDNT
CVLCFHCFNKDDHKGHNVTMYISEGNSGGVCDCGDPEAFVKELNCKCQMSQNNNDDNPMD
LSAMESSLRETITVCLDYILDVLNYSVHALPFIHDNINKEGSKLTSAMLSDYSSLPKKAY
GNAEDINSNDLWYLILWNDERHDFPQAQEAIILASGVSEEKAHKIATQINESGRGILREA
KDPRNLVKSQKLAETEGLVATIISARDYMRDVIVGSILAWLADLSQFANNPTFSDMTRTI
LSDLLLAKGHQFAKPMPVSFFDTFSVNVERKAFENGLLLDNGEIVNGGLTKVKDDFEITH
MERASHFVLEHKSSLDHGNIANSRFQYLLLFQIRMSKPMRELLPSVIIPPLIAELHKKVV
CSQQFIEIYPSLITTLALSDREEDLNILSDISSQLFTCPKTVKSILRSGQVGNVIGPVSQ
LIEEHHSKWNFRTGYPNFIYIEDSSPERKFKSITKAVKWGIHDIGHLADKELASDSLYVF
YERDTLVMLLLFLRNFQGYWPIKRKKGDHVEHEVFDFMVHLEYSIPVLNIAKSVATRSVD
IALVNKAIALIVAFLELRKFDVNRDPNFRVSNDMVSFVNPINSFLSYMIQYQQPEFPRYI
GEDRFWRISEISLRSIVLGSQVKVGLWIRNGNSVSRQASLYFDAILSDLTYLRDLHLNQV
NLMTGDPTWALYNLLGAWELLDWYYGNDTHSTTVYQDRFNTISEKFIVFLYNMITDRSAF
SRTSPEERRLANAGKAIAYALCDEPKSYSFLKSSIDSDISELPEFDDVLLEYTDYQAPSG
LVDAGLYRLKPEIFEKLDPLSIFLDPSKFQVVTESLVKSIAKGKGVKEESVVLEPVFTET
DIPFVKRDIGKFAKTKDFAKLIYKYLQVALDTSDETYLPQLLHLIHAILKDDENLNGPNY
LNENFINIPIADLLLTIVESTMSKYVVNKADFLVDQFVVKDSRIIDNLIDCFGEEFMTSY
KRKKTSLFETEAGKKKRLAEERKNKVMKKFAKRREKFLDKNKEFGQDSHIGTNDGSHGEH
VSLRTCVLCGEEESSHSIFGILASVTDAATLWKIPVDDLHTDLAFRSWDSQSTMKAGQIY
GKGYSGFSEDDSAFSKSRVMAQVFSTCGHGMHYDCYIRDSPGSQHYACPLCHNLQDIFVP
TFLPPADGGGFSQAEIVRSELYSKYNKITSSVGLYKSKKIIESFVSDKYYGDKNFDVYGK
ILSEQLFHHTSDTRYLVGINNNEKFFNHIMKVNVLIADTIRMNEIASRLSGEKSLSNFLG
QISGSVKTLIKTLIQCRAVMYECRSNSHLLGTSYDLQFEVNSFWNSDNLLDGIFNEVVTL
FFQTDESITTLARLGLTKLVTIATFALIKRLNDPIHGENFKSYLISTPLELNSQTSDALV
ILLGNVVLDSGSDIDSNNKQLLVSIYCSLERLLLPYLRQMVILVDLLTSKNFGENTHESL
PEFNNLESEVLKQTRIDSADALCHVLNLPTLDQIVASIAFEGNDLDYNVFDVVLSAKIPK
YINSGILTLQYPAVVKLIELPEDYTSCITETYSDKRGYDRIICLSCGDLLKSTRFAFHMS
ECCSHTNVFFLPRLNVLRICTHIGHNRISIEIPAPYLTAHGEVKKKRVNGKATLNTYRYQ
YLNKLWLDQGLYGFVTRNLFGTRQSLDDLNIDVGRNDDAEDFYDDSDQLDDEVFGEVNSF
IW
NT seq 5409 nt   +upstreamnt  +downstreamnt
atgtctgttgatgagctcaagcagttcctcgtcggacttcccgcggcgttggactacatc
gtgcctctgggagtgaaccataacgtcttcagagctctctactactgtgccaccaataaa
ggacaatgtctttccaccattttgccgtctgtgcctctcccggagatcgaaaagatccag
cttcaaggtctaaactttgcctttctgctcagcgatgaaaacaaactcttctatcgtaac
tccagacgcctggcttctaatgcctctcattactcccatcctcggggcaaagtctgtgcc
cgtctgtttcgaagcaaggaacctgtctatcgttgcgaggagtgtggtttcgataacact
tgtgtgctttgcttccattgcttcaacaaggatgaccacaagggccataacgtgaccatg
tacattctggaaggcaacagtggaggtgtctgcgattgcggagatccagaagctttcgtc
aaagagctcaattgtaagtgccaaatgctgcaaaataacaatgatgacaacccgatggat
cttctggccatggagtcgtcgcttagggaaacgattaccgtctgtctcgactatatccta
gacgtcttgaactactctgtccatgctttaccatttatccacgacaacatcaacaaggag
ggctctaaacttaccctggcaatgctctcagactactcgagcctccccaaaaaagcctat
ggtaatgcagaggacattaattccaacgacttgtggtacttgattctttggaacgatgaa
agacacgattttccccaggctcaggaagctattatattagcttcaggtgtttctgaggaa
aaagcccataagattgcaactcagatcaacgaatctggaagaggaatcttaagagaagca
aaagatccacgcaatctagtaaaaagccagaagctagcagaaacagagggtcttgtggct
accattatctcggctagagattacatgagagacgtaattgtagggctgatcttggcatgg
ttggccgacttgtcgcaatttgccaacaaccccaccttcagtgatatgaccagaaccatt
ttgtcggatttgctccttgccaaagggcatcagtttgctaagccaatgccagtgagtttt
ttcgatactttttccgtaaatgtagaaagaaaagcatttgaaaacggacttttactcgac
aatggtgagattgtaaatggaggattgacaaaggtcaaagatgacttcgaaatcacccat
atggaaagagcgtcccattttgtactagagcataagagtagccttgaccatggcaatata
gccaattcacggtttcagtacttacttctatttcagatcagaatgtcgaaaccaatgcgt
gaattgctaccctctgttatcattccacctttaattgccgaattacacaagaaagtagtc
tgttctcaacagtttattgagatatacccttccctaatcactacgctagctctttcagac
agagaggaagacttaaacattcttctggacatctcgtcacagctattcacatgtcccaaa
acagtaaaatcaatcctcagaagcggtcaagtaggtaatgtaattggccctgtactgcag
ttgatagaagaacaccattccaagtggaatttccgcacgggttaccccaatttcatatac
attgaagattccagtccagaacggaagttcaagtccataactaaagcagtgaagtggggt
atccacgacattggtcatcttgccgataaagaactagcttctgacagcttgtatgtgttc
tacgagagggataccttggtgatgttgcttttattcttgcgaaacttccagggatactgg
cccatcaaaagaaaaaagggagaccatgttgagcatgaagtgtttgattttatggtccat
ttagaatattccatccccgttcttaatatagcgaaatctgtagcaactagatctgtcgat
attgctctcgttaacaaagcgattgcacttattgttgcctttttggagttgagaaaattt
gatgtgaatcgcgatccaaatttccgggtaagcaatgacatggtttcgtttgtaaacccc
atcaactcgttcttatcatatatgatccagtatcaacagcctgagtttccgagatacatt
ggcgaggatagattttggcggatctcagagatttccttacgaagtattgtcttagggtcg
caagtcaaagttggtctttggatcagaaacggaaactcagtttctagacaggcttcgttg
tatttcgatgctattttgagcgacctaacttatctcagagatttacatttgaaccaggtc
aacttgatgaccggggacccaacttgggctttgtacaatttacttggcgcatgggaactc
cttgattggtactatggcaatgacacacattctactacagtgtaccaagacagattcaac
actatttcggaaaagttcatcgtttttctctacaacatgattaccgaccggagtgctttt
tcacgcaccagccctgaagagagacgactcgccaacgcaggaaaggccatagcttatgct
ctttgtgacgaacccaaatcgtactcgttcctcaagagctctatagattctgatatctca
gagttgcctgaattcgatgacgtcttgttagagtatactgactaccaagctccatcaggt
ttggttgatgcaggcctttaccggttgaagcctgaaatcttcgaaaaactcgatccgttg
agcattttcttggatcccagtaagttccaggtagtgactgagtctttggtaaagagtatt
gctaaaggcaaaggagtcaaagaagaatcggtggtcttggagccagtatttacagaaact
gatattccttttgttaaaagagatattggcaagtttgcaaagacgaaagattttgccaaa
ttgatctacaagtacttacaagtagctttggatacatctgatgaaacttatcttccgcaa
cttcttcatttgatccatgctattttgaaggatgacgaaaacttaaatggacctaactat
ttgaatgagaattttatcaatattcccatcgctgatctcctccttacaattgtggaatca
acaatgtctaagtatgtggtcaacaaggctgatttcttggtcgatcagtttgttgtcaag
gatctgagaataattgataatcttattgattgctttggggaagaattcatgacgtcgtat
aaacgtaagaagacgagtttatttgagacagaggcggggaagaagaagcgtttagctgaa
gaaagaaagaataaggtaatgaagaagtttgccaagagaagagaaaagttcctagacaag
aacaaggaatttggacaagatagtcatataggaactaatgatggttcccatggcgaacat
gtttcacttagaacatgtgttctatgtggagaagaagaatcttctcatctgatctttgga
attcttgccagtgttaccgatgcagcaacgttgtggaaaattcccgttgatgatcttcac
acagacttggcattcagatcatgggactcacagagcacgatgaaagctggtcagatttac
gggaagggatatagtggcttttcagaagatgactccgcattttcaaaaagtagggttatg
gctcaagtattctctacctgtggccatggaatgcactatgattgttatattagagatagt
cctggttcacaacactatgcttgtccactatgtcacaatttgcaagacatatttgttcct
accttccttcctccagccgatggaggaggattttctcaagcagaaatcgtcaggctggag
ttgtactcgaaatacaacaagatcacgagctccgttggcttgtataaactgaagaagata
attgaatcttttgttagtgacaagtactacggagataaaaatttcgatgtatacggaaaa
atcttatctgagcagttgttccatcatactagcgatactcggtatttggttggcatcaac
aataacgagaaattcttcaaccatatcatgaaagtgaacgttttgatagccgacacaatc
agaatgaatgagattgcgagtcgtttgagtggagagaagagcttgtctaacttcttgggc
cagatttctggttcagtgaagacattaattaagactttgatacagtgtcgtgccgtcatg
tatgaatgcagaagcaattctcatctcttgggtacatcctacgatctccaatttgaagtt
aactccttctggaattctgacaacctacttgatggaatcttcaacgaagtagtaacgctc
ttctttcagacagacgagtccataactaccttggcaagactaggattgaccaagttggtg
acaattgctacattcgctttgattaaaagactaaatgatcccattcatggtgaaaatttc
aaaagctacctcataagtacaccactagaattaaatctgcagacaagcgatgcattggtt
attcttcttggaaatgtagtgttggatctgggttctgacattgactcaaacaataaacag
ttgctcgtatccatctattgcagtcttgaaagattgctcttgccatatctcaggcagatg
gtgatcttggtagacttacttacgtctaagaattttggtgaaaacactcacgagagcttg
cctgaatttaataatttggaaagtgaagtattgaagcaaacgcgtattgactcagctgat
gcactttgccacgtattgaatttgcccactttggaccaaattgtagccagtattgctttt
gaaggaaacgaccttgactacaacgtttttgatgttgttttaagtgcaaagattcccaaa
tatatcaactccggaatcctcactctccagtatcctgctgtagtgaagttgatcgaattg
cccgaagactatacatcgtgtattacggagacttattcagataaacgtggctacgataga
atcatctgtttgtcttgtggtgacttactcaagagcaccaggtttgcatttcatatgtct
gaatgctgtagccataccaatgtcttctttcttcccagattgaacgtgcttagaatttgt
actcatatcgggcacaatcgcatcagcattgaaattcctgctccctacttgacagcccat
ggtgaagtcaagaagaagagagtcaacggtaaggctacgttgaatacctacaggtaccag
tacttgaacaagttgtggctcgaccaagggttatatggatttgttactagaaacctattt
ggaaccagacagtcattggatgacttgaacatcgacgttggaaggaacgatgacgcagaa
gacttctacgatgacagtgaccaattagatgatgaggtatttggagaagtaaatagcttc
atctggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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