KEGG   Psychromonas ingrahamii: Ping_0053Help
Entry
Ping_0053         CDS       T00450                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pin  Psychromonas ingrahamii
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pin00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Ping_0053
Enzymes [BR:pin01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Ping_0053
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Ping_0053
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(76031..76843)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETSRKGISPHLINKSVQNVVLRHTQLRWKIPQDLLSDIKDKILLSIDRRAKYL
LFNFTSGTLLIHLGMSGSLRICPLNSPPKKHDHADLIFADCLLRYTDPRRFGAILWLGLT
PEDSPLLNKLGPEPLNDDFNAKYLYQQATKRKLPVKQFIMDQKVVTGVGNIYATEALFNS
GISPIRAAGNISEKRYQILVTEIKEILQQAIKQGGTTLKDFVGSDGKPGYFQQTLQVYGK
TGQQCPSCETPLKAVKLAARASVYCPECQS
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgccagaattaccggaagtagaaaccagcagaaaagggatcagcccgcatcttattaat
aaatcggtccagaatgttgtgctgcggcatactcaattacgctggaaaataccgcaggat
ttattatcggacattaaagataaaatattactttcaatcgatcgccgtgctaaatacctg
ctgttcaacttcaccagtggcaccttgttaattcacctgggcatgtcgggcagtttacga
atttgcccattgaatagcccgccaaaaaaacatgaccatgccgatcttattttcgcagat
tgtttattacgctataccgatccacgccgtttcggggccattttatggttgggtttaacg
ccggaagactcgcctctattaaataaactcggtcctgagccgctcaatgatgattttaat
gcgaagtatttataccagcaggcgactaaacgaaaactgccggtaaaacaatttattatg
gatcaaaaagtcgtaacgggtgtgggtaatatctatgcgacggaagccttatttaatagt
ggcatctcgccaataagggcggccggcaatatctctgaaaaacgctatcaaatattagtt
actgagattaaagaaattttacagcaagcgataaaacaaggcggcaccaccctgaaagat
tttgtcggtagtgatggtaaacctggctattttcaacagacgctacaggtttatggtaaa
acaggtcagcaatgccctagctgcgaaacccctttaaaagctgttaaattagccgcaaga
gccagtgtgtattgtccggaatgccagagctag

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