KEGG   Pirellula sp. SH-Sr6A: VN12_22370
Entry
VN12_22370        CDS       T04360                                 
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
pir  Pirellula sp. SH-Sr6A
Pathway
pir03030  DNA replication
pir03430  Mismatch repair
pir03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VN12_22370 (dnaX_1)
   03430 Mismatch repair
    VN12_22370 (dnaX_1)
   03440 Homologous recombination
    VN12_22370 (dnaX_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pir03032]
    VN12_22370 (dnaX_1)
   03400 DNA repair and recombination proteins [BR:pir03400]
    VN12_22370 (dnaX_1)
Enzymes [BR:pir01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VN12_22370 (dnaX_1)
DNA replication proteins [BR:pir03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VN12_22370 (dnaX_1)
DNA repair and recombination proteins [BR:pir03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VN12_22370 (dnaX_1)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA RuvB_N AAA_22 AAA_19 AAA_16 AAA_30 AAA_5 AAA_14 AAA_18 Glyco_tranf_2_5 HerA_C AAA_2 CDC27 AAA_7 AAA_24
Other DBs
NCBI-ProteinID: AMV34889
UniProt: A0A142Y6Q6
Position
complement(5480977..5482983)
AA seq 668 aa
METPLDATTGNQKYTVVARRYRPKTFSELVGQSTVAQALLNAIHTNRVGHAYLFTGARGV
GKTSTARIFAKALNASASADGEFDPQSDIAQAIDSGEDMDVIEIDGASNRGIDEIRQLRA
NAAVRPSRSPYKIYIIDEVHMLTTQAFNALLKTLEEPPGHVKFIFCTTDPEKMPITVLSR
CQRFDFPPVHTDQILGRLQYICENEGTEADEAALQIIARRAAGSMRDSQSLLEQLLSFSG
NRITVSDVHAMLGTADETRLASFASKMIQRDAAGALDELNVAAGEGVDVGQLAEQLLGYL
RDMMVVTVGCGSDLIKTANPSSLEPLRTWGQQWGVASLMAAIQILDETIVKMRHSVQSRV
LVEIAIVQICQLQDLQALTDLVKALASGQSLPPPRPPVHTTTALPTPPAGSSKPATPAQP
VVPSTGSSQQKPASAAASESTEAKKKDETVTGATLPSRNEPSPGTEKPAALTAAATSPTT
ATQANDQTAALSVSKEGEPTPKNPSDTNVADTPLHQLRAAAQSIGGLIVECVNMITRVQV
ADKGKWRAFVAKEGRFAIDYFQTADNSRKLTSSLADQFRVEAVLEFTLTDEVAPHVESKA
PAPVVEEFRPSVPQSQLIRKAMTNPIVQQFVEMFDGQIVRVDPAQSIRPVIAQTSTSEPS
ELIADTDE
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggaaactcccttggatgctacgaccggaaatcagaaatacacggtcgtcgcacgtagg
taccggccgaaaaccttctccgaattggtagggcagtcgacggtagcccaggcgctgctc
aatgccatccatacgaaccgggtcggacatgcgtatctctttaccggggcgaggggggtt
ggaaaaaccagtaccgcccgcattttcgcgaaggcgttgaatgcttccgcgagcgctgac
ggagaatttgaccctcaatccgacatcgcccaagcgatcgactcgggtgaggatatggat
gtcatcgagatcgatggcgcgagcaatcgtgggatcgatgaaattcgacagctccgcgcc
aacgctgcagttcgtcccagccgatctccgtacaagatctacatcatcgacgaagtccac
atgctgacaacccaggcgttcaacgcattgttgaagacgctggaggaaccgcctggacat
gtgaagttcatcttctgcaccacggacccagaaaagatgccgatcacggtattgtcccgg
tgccaacgttttgatttcccccccgttcataccgatcagattttggggcggcttcaatac
atttgcgaaaacgagggtaccgaagcagacgaagccgcactgcagatcatcgctcgccgc
gctgcaggctccatgcgtgacagccagtccctactggaacaactgctcagctttagcggt
aatcggatcaccgtatccgatgtgcatgcgatgcttggaacagccgacgaaacgagactg
gcttcgttcgcatccaaaatgattcaacgcgatgcggccggagccctcgacgaattgaac
gtcgcagcaggagaaggagtcgacgtcggtcagctcgccgaacaacttcttggttatctg
cgggacatgatggtcgtgacggtcgggtgcggtagcgaccttatcaaaaccgcgaatcca
tccagtctcgagccattgcgaacctggggacaacaatggggcgtcgcctcgctgatggct
gcgattcagattttggatgaaacaatcgtcaagatgaggcacagcgtccagagccgtgta
ctcgtcgaaatcgccatcgtccaaatttgtcagcttcaagatctgcaggccctcacagac
ttggttaaggccctggcgtcggggcaatccctccctcccccccggccgcccgttcatacc
acgacggcactaccaacgcctcctgcaggatcgtcgaagcctgcaactccagcgcagcca
gttgttccaagcacaggttcctcgcaacaaaaacctgcctccgctgcagcatcggaatcg
accgaagcaaaaaaaaaagatgagaccgtaacgggagccacgctcccttcgagaaacgaa
ccatcgcccgggaccgagaaacccgccgcactgaccgccgctgcgacttcgccgacgacc
gcgacacaagcgaacgaccaaaccgcagccctgtccgtgtcgaaggagggggaaccgact
cctaaaaatccttccgatacgaacgtcgcggacactcccctgcatcaactgcgagccgca
gcgcaatcgatcggtggattgattgtggaatgcgtcaacatgatcacccgtgtccaggtc
gctgacaaaggaaaatggagagctttcgttgccaaggaaggtcgatttgcgatcgattat
ttccaaactgcggacaattccagaaagctcacaagctctcttgctgaccaattccgcgtc
gaagcagttcttgaattcactctcaccgatgaggtcgccccgcatgttgagagcaaagcg
ccggcacccgttgtcgaggagttccgaccgagtgttcctcaatcccaattgattcgcaaa
gcgatgaccaatcccatcgttcagcaatttgtcgaaatgttcgatggccagatcgttcga
gtagatccagctcaatcgatccgtccggtcatcgcgcaaacgagcacttccgagccgagc
gaactaatcgccgacaccgacgaatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (30)   

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