KEGG   Paenibacillus kribbensis: B4V02_24535
Entry
B4V02_24535       CDS       T05249                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
pkb  Paenibacillus kribbensis
Pathway
pkb03030  DNA replication
pkb03430  Mismatch repair
pkb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pkb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B4V02_24535
   03430 Mismatch repair
    B4V02_24535
   03440 Homologous recombination
    B4V02_24535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pkb03032]
    B4V02_24535
   03400 DNA repair and recombination proteins [BR:pkb03400]
    B4V02_24535
Enzymes [BR:pkb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B4V02_24535
DNA replication proteins [BR:pkb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     B4V02_24535
DNA repair and recombination proteins [BR:pkb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     B4V02_24535
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA AAA_30 RuvB_N DnaX_C TIP49 AAA_5 AAA_19 AAA_16 AAA_22 AAA_7 AAA_14 AAA_2 AAA_assoc_2 Rad17 PIF1 nSTAND3 AAA_6 AAA_18 Mg_chelatase AAA_28 AAA_24 RNA_helicase DUF815 GNAT_C VapE-like_dom TsaE
Other DBs
NCBI-ProteinID: ASR49615
UniProt: A0A222WUG9
Position
complement(5477127..5478881)
AA seq 584 aa
MEHIALYRAWRPQAFKDMVGQQHIIQTLQNAIRENRTSHAYLFSGPRGTGKTSAAKILAK
AINCEHGPAPEPCNECEACKRITAGAVMDVQEIDAASNRGVEEIRDLRDKVKYAPTEVRH
KVYIIDEVHMLTTEAFNALLKTLEEPPPHVMFILATTEPHRIPATIISRCQRFDFRRVSL
EEQTERLDLICRQENIQADADALQYIARLSDGGMRDAVSVLDQISSFTDGPVTYQQVLDM
TGGIASEQFGKLALALLKEDVGTVLQMIENFMQEGKSADKCMENLLYYFRDLLMIKMVPQ
ATKMTERVLDSEQFREVADAFTKEQLFAMIDTLNRYQSEMKYAVQPQTLFEVALLKLCSI
PGETVAVAQPTAQRSGAVAADQGDVAALKRQLAELEKKLERALQGGLAVGAGQEASSGGR
QASGGRAPAPRISAPAKLPPQLDRYIAEKSSEAFAATGRKWSQILQGVKEAKVTVHAWFM
DGEPVSVLEDSVLVAFKNNIHRETTEKPANKQVIEKVLHEQLGHPYRLVTMMQKDWSAAI
EGVSDQPAEEFQLEPEQDTPGKSKEPWIDEAIQLFGEDLVVIKD
NT seq 1755 nt   +upstreamnt  +downstreamnt
ttggaacatatagcgttgtaccgtgcttggcggcctcaggccttcaaagacatggtagga
caacagcatattatccagacattgcagaacgccattcgtgaaaatcgcacgtcccatgct
tacctgttcagtggtccgcgaggaacggggaagacaagtgcagccaaaattttggcaaag
gcaatcaactgtgagcatggacctgcaccggaaccttgcaacgaatgcgaggcctgcaaa
cggatcacggccggggcagttatggatgtacaggaaattgatgcagcctccaatcggggc
gttgaagagattcgtgatttgcgcgataaagtcaaatatgcgccgacagaagtgcggcac
aaggtttatatcattgatgaggtgcacatgttgacgacggaagcgttcaatgcgctgctg
aagacgctggaagagccgccgccacacgtcatgttcatattggccacgacagagccacat
cggatcccggcgacgattatttcacgctgtcagcgttttgacttccggcgagtatcgctg
gaagagcagacagaacggcttgatctgatatgtcgacaggagaacatacaagctgatgca
gatgcactgcagtacattgcgcgtctttcagatggcgggatgcgggatgcggttagcgtt
ttggatcagatatcctcgtttacagacggcccggttacctatcagcaggtgctggatatg
acgggaggcattgcgtccgaacaattcggcaagcttgcgttggcgctgctgaaagaagac
gtgggcacggtgcttcaaatgatcgagaactttatgcaggaaggtaaaagcgcggataag
tgcatggagaatctcctgtactatttccgggatttgcttatgatcaagatggtgccacag
gccactaaaatgacggagcgagttctggattcggagcagttcagggaagtagcagatgcc
tttaccaaggagcaactctttgcgatgatcgacacccttaatcgttatcagagcgagatg
aaatatgctgttcagccgcaaactctgtttgaggtagctctgttgaagctgtgcagcatt
cccggggaaacggtagctgttgctcagccgactgcacagcgatctggcgctgttgccgct
gatcagggagatgtagcggcgttgaagcgtcagcttgctgagctggagaagaagctggaa
cgcgcgttgcaaggtggattggccgtcggggcgggccaggaggcctcatcgggtgggcgt
caggcttccggtggtcgtgcccctgctccgcgaatttctgctccagccaagctcccccct
cagctggatcgttatatcgccgagaagtcgagcgaagcatttgcagcaacggggcgtaag
tggagccagattttgcagggagtcaaagaggcgaaggtcacggttcatgcatggtttatg
gacggtgagccggtttctgtgttagaggacagcgtgttggtagcctttaaaaacaatatc
catcgtgaaactaccgaaaagcctgcgaataagcaggttattgagaaggttctgcatgaa
cagttgggccatccatatcgtctggtgacgatgatgcaaaaggattggagtgctgcgatt
gaaggagtttctgaccagcctgccgaagagttccaactggagccggagcaagatacgccg
ggaaagtccaaagaaccctggattgatgaagcaattcagcttttcggggaagacctggta
gttattaaagattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (28)   
   Pfam (28)   
All databases (41)   

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