KEGG   Pseudomonas knackmussii: PKB_4977
Entry
PKB_4977          CDS       T03081                                 
Symbol
rlmE
Name
(GenBank) Ribosomal RNA large subunit methyltransferase E
  KO
K02427  23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
Organism
pkc  Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:pkc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pkc03009]
    PKB_4977 (rlmE)
Enzymes [BR:pkc01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.166  23S rRNA (uridine2552-2'-O)-methyltransferase
     PKB_4977 (rlmE)
Ribosome biogenesis [BR:pkc03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PKB_4977 (rlmE)
SSDB
Motif
Pfam: FtsJ Methyltransf_31 PCMT
Other DBs
NCBI-ProteinID: CDF86290
UniProt: A0A024HMK6
Position
complement(5243789..5244412)
AA seq 207 aa
MARSKTSHRWLKEHFDDPYVKMAQRDGYRSRASYKLLEIQEKDRILRPGMTVVDLGAAPG
GWSQVTSRVIGDKGILIASDILPMDSIPDVTFIQGDFTEDEVFAQLLEAIGENPVDLVIS
DMAPNMSGLPAVDMPRAMFLCELALDLCTRVLRPGGDFLIKIFQGEGFDTYLKMVRENFE
KVQMRKPLSSRDRSREQYLLARGFRGA
NT seq 624 nt   +upstreamnt  +downstreamnt
gtggcccgttccaagactagccatcgctggctaaaagaacatttcgacgatccttacgtg
aagatggcgcaacgcgacggctaccgctcgcgcgccagctacaagctgctggaaatccag
gagaaggatcgcatcctgcgcccgggaatgaccgtggtcgacctcggcgcggcgccaggc
ggctggtcgcaggtcaccagtcgggtcatcggcgacaagggcatcctgatcgcttccgat
atcctgccgatggacagcattccggacgtcaccttcatccagggcgacttcaccgaagac
gaggtcttcgcccagttgctcgaggccatcggagaaaatccggtagaccttgtgatttcc
gatatggcccccaatatgagtgggctgcccgctgtggacatgccccgtgcgatgttcctc
tgcgagctggcactggacctctgcacccgggtgttgcgcccgggcggcgattttctgatc
aagatattccagggtgaagggttcgacacttacctgaagatggttcgcgagaatttcgag
aaggtacagatgcgcaagcccctgtcctcccgcgaccgctcccgtgagcaatatctgctc
gcacgcggattccgcggagcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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