KEGG   Phaethon lepturus (White-tailed tropicbird): 104625332
Entry
104625332         CDS       T08325                                 
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
plet  Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03440  Homologous recombination
plet03460  Fanconi anemia pathway
plet04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:plet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104625332 (BRCA1)
  09124 Replication and repair
   03440 Homologous recombination
    104625332 (BRCA1)
   03460 Fanconi anemia pathway
    104625332 (BRCA1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:plet01009]
    104625332 (BRCA1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:plet04121]
    104625332 (BRCA1)
   03036 Chromosome and associated proteins [BR:plet03036]
    104625332 (BRCA1)
   03400 DNA repair and recombination proteins [BR:plet03400]
    104625332 (BRCA1)
Enzymes [BR:plet01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104625332 (BRCA1)
Protein phosphatases and associated proteins [BR:plet01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104625332 (BRCA1)
Ubiquitin system [BR:plet04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104625332 (BRCA1)
  Multi subunit Ring-finger type E3
   BRCC complex
    104625332 (BRCA1)
Chromosome and associated proteins [BR:plet03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     104625332 (BRCA1)
DNA repair and recombination proteins [BR:plet03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     104625332 (BRCA1)
    BRCA1-A complex
     104625332 (BRCA1)
    BRCA1-B complex
     104625332 (BRCA1)
    BRCA1-C complex
     104625332 (BRCA1)
    BRCA complex
     104625332 (BRCA1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     104625332 (BRCA1)
SSDB
Motif
Pfam: BRCT_assoc BRCT zf-C3HC4 zf-C3HC4_4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 BRCT_2 zf-Nse zf-C3HC4_3 zf-RING_6 zf-RING_5 BRCT_3 zf-ANAPC11 TRAF3_RING zf-RING_4
Other DBs
NCBI-GeneID: 104625332
NCBI-ProteinID: XP_010291235
Position
Unknown
AA seq 1858 aa
MDFSVIAIGEVQNVLSAMQKNLECPICLDVVEEPVSTKCDHIFCRFCMFKLLSKKKKGVI
QCPLCKTEVTKRSLKENSRFKQLIEGLFETIHAFELDTGVKFLNSHHFPKTSTEATAAEF
LCKESSVIQSKGFRKRKKSAEENGQQNCTLQVDTQLTDTRVKRCPLRIKAQKYDSEKEIY
IEFGSDSSEELFKQASNTGLEDKEVLQISSQEKLEEFKSAEKGSEYSCNTHLDKVAAKEI
ILPNVIGESDFSKEGLSKKSTRSITEYAKLGQVNTTECQSFPLKVFAVDLLTEQCDRIGN
ASPLRNGDTSFFKNTEEMDAEQTQCNSKSKEFDLKDSSESGLDKSKEIDIVQTVEAVETY
EPKNDSSHEKELPVEKLLKPETLHCATQSQVSRKRLKRSIQKVNEWFSKSNEILSSNSSQ
DDSAGATDVSGEGDACLSDKDSCISEKTDPMVDSMETEVVERNKRWSKQTADSIKDKIFG
KTYKRERKSNPSILREILPTTKKEDAAADEKCLNNSSKDRLKQRRKTASLLQPEDFIKKK
GIEEADDCPQSINWCLGDAEKKKCDQSSAVNESHLSESREDNTRAELDEGGGSVWKKAAE
KVTGKYCDGELKLSNCDQKSTKKSSSAAKRCRHSTRTVCALQLVVDRNSVSPDPSEPQID
SYSSSGEPRKADSERRQVRRSRRLQLLSEEMTKETGKGVVIKGARKYDSVHEGSFFGVRG
DVLVHTSECKDLCEPQGMLSYKPLTNLKGGDLAANEIQISLKNSSDIAETGKSLFNPTSS
CQHSNCSCFAPDAGSQEGEILCSPLHLQSPSMTVVHTASHPTEELRESRTTFPQDSRHDA
QNVPGDFRTGKLTMAKNILEFMKEAEDSELDTQYLRNIFRHSKRLSFSLYRTPMKACTVE
DAASETLKIACADQVENKHSKYLKPENLQEEKTTAESLSRVCEKEKLKTYESACVSPVTC
FVGNTECMHAGEHQEDVSQAANQGNLTVIRMGAARTEDENRSQKGEQGNEKTVSTDIGIE
SELRQNPIKNNSQSDQSNTEEHIFKRTDLNTVNEIGFSSESNQAGKAKVVDSKGPILHFP
SRSMICPETCQQRPAQFSCEVTGEKSSKRERKQVKGNEEAATQTASTGMPECLVTEALEE
PLKGNSDFTGLSETPDGLLCSDDDIEKNTSFSETDRKERSAVFVKRSDNTLVKELHNRNV
SSQGIQRSRRRAQKLQSSDEESSEDEDLPCFQTLIFGKSVSTPLQINNQVTSVVESSVSP
ITLPHNESHDDNNMQKMPEAALSNGCVSPSQESECSVNLFSSQSNMSEESVDGAQELKKP
LIQVHTSKQVSNVNESKETFQSCDGGLKRSKTNFKDECQEDPNMGANLGEASGYDSETSN
VEDSCGPFSQGEILTTQQKNAMQNNLKKLQQEMAVLEAVLKQHGSQDCEFLPICRELPHS
SSEETLGMEQMRQQRGAESTSEGNLENHKCSCSKEFSANDFHVMPSDSLNSKIRELEKER
FTELLLPSSKSYLLKRTDFKKGLQCDSVLKNTAPSEKTKPVQEAVQEYSQCQLEAENADE
QKSGTRLNSACVLPNLSGNVTRSPNSSSSSERLLNPQTAEATDSSLVSQNANKSRAQEHK
SKRSVCFPVSVLHNAAGKENATSPVVTNRKKMSIVASGLNPSEHLVVQKFARKTESTLSN
HITEGTTHVVMKTDKELVCERTLKYFLGIAGRKWVVSYQWVIQSFKEGRILDEEDFEVRG
DVINGRNHQGPKRARQSLTEKIFKDFEICCYGPFTDMTTEHLEWMVELCGASVVKQVHLF
THKTNSNAVVVVQPDAWMENMDYRAIQQKNSVAMVIREWVLDSVACYKCQEFDGYLVS
NT seq 5577 nt   +upstreamnt  +downstreamnt
atggacttctcagtgattgctattggagaggtacaaaatgtgctttcagcaatgcagaag
aatttggagtgcccaatatgcttggatgtggtagaagagccagtttcaacaaaatgtgat
cacatattctgcaggttctgcatgttcaaactcctcagcaaaaagaaaaaaggtgtgata
cagtgtcctctgtgtaagactgaagttaccaaaagaagtctgaaagaaaattccagattt
aagcaactaattgaagggttgtttgaaactatccatgcatttgagcttgacactggagta
aagtttttaaatagtcatcacttccctaaaacatccacagaagccactgctgctgagttc
ctgtgtaaagaaagttctgttatccaaagtaagggcttcagaaaaaggaaaaaaagtgct
gaagaaaatggacaacaaaactgcaccttgcaagtggatacacagcttacagataccagg
gtcaaaagatgtcccctaagaatcaaagcccagaaatatgactctgaaaaagagatttat
atagagtttggctctgattcatctgaagagctttttaaacaggcaagcaatactgggtta
gaagacaaagaagtgcttcagatttcatctcaagaaaagctagaagaatttaagagtgct
gagaaggggagtgaatattcttgcaatacacatcttgacaaagtggctgctaaagaaata
attctaccaaatgtcataggtgaaagtgatttctcgaaggaaggcttgagcaagaaaagc
actcggagcatcactgaatatgccaaacttggccaagtgaatacgactgaatgccagagt
tttcctttaaaggtttttgctgtagacctactcacagagcagtgtgacagaataggtaat
gccagtcccttaaggaatggggacacatctttctttaagaacacagaagaaatggatgca
gagcaaactcagtgcaacagtaaaagcaaagagtttgacttaaaagatagctcagagagc
gggttggataaaagcaaggaaatagatattgtacaaactgtggaagctgtggaaacgtat
gaacccaagaatgattcttcccatgaaaaagaacttcctgtggagaaactacttaagcca
gagacacttcactgtgctacccagagtcaagtctctaggaagagactgaagcgaagcatt
cagaaagtcaatgaatggttttcaaaaagcaatgagattctgtcttccaattcttcccag
gatgattctgctggagcaactgatgtttcaggtgaaggagatgcatgtttatcagataaa
gattcctgtatttcagaaaagactgaccctatggtagattccatggaaactgaagtggtt
gaaagaaacaaaagatggtcaaaacaaacagcagatagcatcaaagacaaaatatttggg
aaaacatacaagagagagaggaagtcaaatccctctatcttgagagagattttacctact
acaaaaaaggaagatgcagctgctgatgagaagtgcttgaataattccagtaaagacaga
ctaaagcaaagaaggaagactgcctctctcctgcagcctgaggatttcatcaagaaaaaa
ggtatagaagaggcagatgactgccctcaaagtattaactggtgccttggggatgctgaa
aagaaaaaatgtgatcaaagctctgctgttaatgagagtcacctgtctgaaagtagagag
gataatacacgagcagaacttgatgaaggaggaggatccgtatggaagaaagctgctgaa
aaggtgactggcaagtactgtgatggggagctgaaactgagtaactgtgatcagaaaagc
actaaaaaaagtagttctgcagcaaaaagatgcaggcattctactagaaccgtgtgtgct
ctacagttagtagtggatagaaactctgtttccccagatccatctgagccacagattgat
agctattcaagcagtggagaaccaaggaaagctgattctgagcgaagacaagtcaggcgc
agcaggagacttcagttactttctgaagaaatgacaaaagaaacaggaaaaggagtagta
attaagggagcaaggaagtatgacagtgtgcatgaagggtctttctttggagtccgaggg
gatgtattagttcacacttctgaatgcaaagacttgtgtgagccccagggtatgctgagt
tacaagccactcactaatctgaagggtggtgatctggctgcaaatgaaatacagattagt
ctaaagaattcatctgacattgcagaaactggaaaaagtctcttcaatcctacatcttca
tgccagcattcaaactgtagttgctttgcacctgatgcaggttctcaagaaggtgaaata
ctatgtagccctttgcacctacagtctccctcaatgactgttgtgcacactgcttcccac
ccgactgaagagttgagagaatcacgtactacttttccccaggatagtagacatgatgca
caaaatgttccaggggacttcagaactggaaagttgacaatggctaaaaatattttggaa
tttatgaaggaagctgaagatagtgagttagacacacaatatctgcgaaatatatttagg
cattcaaaacgcctatcatttagcctttatcgtactcccatgaaggcgtgtacagtagaa
gatgctgcttctgaaactttaaagatagcgtgtgctgatcaggtagaaaataagcatagc
aagtatttaaaaccagaaaacttgcaagaagagaaaacaactgctgaaagcttgagtagg
gtttgtgagaaagagaagcttaagacctatgaatctgcttgcgttagtcctgtgacttgc
tttgttggcaacactgaatgtatgcacgcaggggaacatcaagaagatgtttcacaggct
gcaaatcaagggaatctgacagtaataagaatgggtgctgctaggacggaagatgaaaac
agatcacaaaaaggagagcaaggtaatgaaaagacagtgtcaactgacatagggatagaa
agcgagttgagacagaatccaatcaaaaataatagccaaagtgatcagagtaatacagaa
gagcacattttcaaaagaactgatttaaacacagtcaatgaaataggcttcagttcagaa
agcaatcaagcaggaaaggccaaagttgttgacagcaaaggaccaatactacattttcca
tccagatcaatgatttgtcctgaaacttgtcagcaaaggcctgctcaattcagctgtgaa
gtcactggggaaaaaagtagcaaaagagaaagaaaacaagtaaaggggaatgaagaagca
gcaacccaaactgctagcacagggatgcctgagtgtttagttacagaggctctagaagaa
cctcttaaagggaatagtgattttacaggtttgtctgaaacccctgatggtttactgtgc
tctgatgatgatattgaaaagaacaccagcttttctgaaactgataggaaagagagatct
gctgtgtttgtaaaaagaagcgataataccctggtaaaagaactacacaatagaaatgtt
agttctcaaggtattcaaagatctcgaagaagagcacagaaactgcaatcttcagatgaa
gaatctagcgaggatgaagatttaccatgttttcagacattaatatttggcaaatcagta
agcacacctttgcagatcaacaaccaagtgacatctgtggtagagtcttcagtaagtcct
atcacattgcctcacaatgaaagtcacgatgacaataatatgcagaaaatgcctgaagct
gccctaagtaatgggtgtgtttcaccaagccaggagtcagaatgctctgtcaacttgttt
tcttcccagtccaacatgtctgaagaatcagttgatggagcacaagagctgaagaaacct
ttaatacaagttcatacatccaaacaagtgagcaatgtgaatgagagtaaagaaactttt
caaagttgtgatggagggctgaagagaagcaaaacaaacttcaaagatgaatgccaagaa
gacccaaacatgggagcaaacctaggtgaagcatctggatacgatagtgaaacaagtaat
gtagaagattcatgtggaccattctctcagggtgaaatacttactacacagcagaagaat
gctatgcaaaataacctaaaaaaacttcagcaagaaatggctgtacttgaagcagtgcta
aagcagcatggaagtcaggactgtgaatttttacctatctgtagggaactgccacattcc
agtagtgaagaaacacttggaatggaacaaatgagacaacaaagaggggcagagtcaacc
tcagaaggaaatcttgaaaatcataaatgcagctgttcaaaggaattttcagccaatgat
ttccatgttatgccaagtgattctctcaacagtaaaatcagagagttagaaaaagaaagg
tttacagaattgttgcttccatcttctaaatcctatttgttaaagagaacagatttcaag
aaaggccttcagtgtgacagtgttctgaagaacacagctccttctgaaaagacaaaacct
gtgcaggaagcagtgcaagaatatagtcagtgtcagcttgaagcagaaaatgcagatgag
cagaaatctgggaccaggctaaacagtgcatgtgtcttgccaaatctctctggaaatgtg
accaggagtccaaatagctcttcctcctctgaaaggcttcttaaccctcaaactgcagaa
gcaacagatagttctcttgtatctcagaatgctaataaaagccgtgctcaagaacataaa
tcgaagagaagtgtgtgttttcctgtatctgttctgcacaatgcagctgggaaagaaaat
gctacaagtccagttgtgactaacaggaaaaaaatgtcaattgtggcatcaggtctgaat
ccaagtgagcatttggtggtccagaagtttgcaagaaaaactgagagcactttatctaat
cacattactgaaggaacaacccatgtcgtaatgaaaacagataaggagctggtgtgtgaa
cggacactgaagtactttctgggtattgcaggaagaaaatgggtagttagttatcagtgg
gtaattcagtcttttaaagaaggaaggatactggatgaggaggactttgaagttagagga
gatgtaatcaatgggagaaaccaccaaggtcctaagagggctagacagtctctgactgaa
aagatctttaaagactttgagatctgttgctatggacctttcactgatatgactaccgaa
catctagaatggatggtggagctttgtggtgcctctgtagtgaagcaagttcatctgttc
acacacaaaacaaattctaatgctgtcgtggttgtgcagccagatgcgtggatggaaaac
atggattacagagcaatccagcaaaagaacagtgttgccatggtgattcgagagtgggta
ttagacagtgttgcttgctataagtgccaggagtttgatggttaccttgtgtcttaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system