KEGG   Phaethon lepturus (White-tailed tropicbird): 104628821
Entry
104628821         CDS       T08325                                 
Symbol
LNX1
Name
(RefSeq) E3 ubiquitin-protein ligase LNX isoform X1
  KO
K10692  ligand of Numb protein X 1/2 [EC:2.3.2.27]
Organism
plet  Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:plet00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:plet04121]
    104628821 (LNX1)
Enzymes [BR:plet01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104628821 (LNX1)
Ubiquitin system [BR:plet04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    104628821 (LNX1)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-rbx1 TRAF3_RING
Other DBs
NCBI-GeneID: 104628821
NCBI-ProteinID: XP_010295826
Position
Unknown
AA seq 724 aa
MSQKEEEMEDSSPPLCVTCGQAHLPEENHLYSYTEEVDDDLICHICLQPLLQPLDTLCGH
TFCTACLTNFLVEKDFCPMDRKLVVLQTCRKSSILVNNLLDKLMVSCPFTEHCSEVMQRG
HLEQHFQTQCKGASHYGLTKERKRRSQDWSPDHGSSLAVAALGPELSAAAAIALMTDEPG
LVNPAFSPTSEDSQSGSSPGDLHRSNRNRTRHFERSTIRSRSFKKINKAFSVLRRTKSGS
AVSNQTDREQETVGNSAAGEEGFPRLYHLIPDGEITCIKINRTDPHENLAIRIVGGSETP
LVHIIIQHIYRDGVIARDGRLLPGDMILKVNGMDIKNVPHNYALSILKQPCHVLRLTVLR
EQRYRCRNSGLSLDALCTRDDSFHVVLNKSSPDEQLGIKLVRKADEPGVFIFNLLEGGMA
ARDGQLQENDRVLAINGHDHRYGSPESAAQLIQASEKQVHFVVSRQTRQQTPDILQETGW
SCPAERNNPGKSTLHAVTCHEKVVAVWKDHTESLGMTVAGGASNRDWDLPIYVISVEPGG
VISRDSRIKTGDILLNVNGIDLTGVSRSEAVALLKNTNSSVVLKALEMRACEAREARGHL
PAPEATQATAQSSEWSPSWVTWLGLPRYLYSCKEIVLRRNTSGSLGFSIVGGYEEHTGNK
PFFIKSIVVGTPAYNDGRIRCGDILLAVNGRNTSGMMHACLARMLKELKGKITLTIVSWP
GTFL
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgagccagaaagaagaagaaatggaggatagctctccgccactctgtgtcacctgcggc
caagcgcatttaccggaagaaaaccacttgtacagctacaccgaagaagtagatgacgat
ctgatatgccacatttgcctgcaacctttgcttcagccgttagacacgctctgcggtcac
accttctgcacagcctgccttacgaacttcctcgtggaaaaagacttctgccccatggac
cgcaagcttgtggttctccagacgtgcaggaagtccagcatactagtgaataacctcctg
gacaagctaatggttagctgccctttcacagaacactgctcagaggtcatgcaacgtggt
cacctcgaacagcatttccaaacccaatgtaagggagcatcccactacggccttaccaag
gaacggaagaggcgttcccaagactggtctccggaccatggctccagcttagcagtagct
gccctgggccctgagctctcggcagctgcagccatcgccttaatgacagatgagccgggg
ctagtgaacccagccttcagccccacctcggaggacagccagtcaggcagtagccccgga
gatctgcaccgcagcaaccgaaacagaactcgacactttgaacgctccactataagaagc
agatcttttaaaaaaataaacaaggcgttcagtgtccttcgaaggacaaaaagtggaagc
gccgtttccaaccagactgaccgggaacaggagactgttggaaactctgctgctggagag
gaaggttttcccaggttgtatcacctgattccagatggggaaattacctgcattaagatc
aaccgtaccgatccccatgaaaacctggccattaggattgtgggaggcagtgagactcct
ttggttcacattattatacagcatatttatcgagatggggtaattgccagagatggaaga
ttgctgcctggagacatgatactaaaggtaaatggcatggacatcaaaaatgtgcctcac
aactacgccctgtcaatcctgaagcaaccctgccacgtgctccgactgacagtgctccga
gagcagaggtaccgatgccgaaacagcggactttctcttgatgctctctgcaccagggac
gacagtttccatgttgtgctcaacaaaagcagtccagacgagcagctgggaataaagctg
gtccgcaaggctgatgaaccgggggtatttattttcaacttgctggaaggtggcatggct
gcccgtgatggacaacttcaggagaacgaccgagtgttggccatcaatgggcatgaccat
cggtacggcagtccagagagcgcagcccagctgatacaggccagcgagaagcaggttcac
ttcgtcgtgtcgcggcagaccaggcagcagacccccgacatcttgcaggagacaggctgg
agctgccccgccgagagaaacaaccccggcaagagcactcttcacgccgtcacctgtcat
gagaaggtggtggctgtctggaaagatcacacagaatcgctgggaatgaccgtagcaggc
ggagcatctaaccgggactgggatttgccgatctacgtgataagtgttgaacctggagga
gttatcagcagagacagcaggataaaaacaggtgacatcctcttgaacgtgaacgggatt
gacctgacgggcgtcagccggagcgaggccgtcgccctgctgaaaaacaccaactcgtcg
gtggtgctcaaagccctggagatgagagcgtgcgaagcccgggaggcgcgggggcacctg
ccggcccctgaggccacgcaggcgaccgcccagagcagcgagtggtcaccctcctgggtt
acgtggctggggctgccgcggtatttgtacagctgcaaagaaatcgtattacgaagaaat
acatctggaagtcttggcttcagcattgtaggaggttatgaagaacatactgggaacaaa
ccattctttatcaaatccattgttgtgggaacaccagcatataatgatggcagaattaga
tgcggtgacatcctccttgctgtcaatggcaggaacacatcaggaatgatgcatgcctgc
ttggcaaggatgctcaaagaactgaaaggaaaaattactctcacaattgtgtcctggcct
ggcacttttttataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system