KEGG   Pantoea ananatis LMG 5342: PANA5342_p10321
Entry
PANA5342_p10321   CDS       T01728                                 
Symbol
oppD
Name
(GenBank) ATPase component of various ABC-type transport systems
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
plf  Pantoea ananatis LMG 5342
Pathway
plf02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:plf00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PANA5342_p10321 (oppD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:plf02000]
    PANA5342_p10321 (oppD)
Transporters [BR:plf02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    PANA5342_p10321 (oppD)
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_29 AAA_16 AAA_22 RNA_helicase AAA_23 Sigma54_activat AAA_7 DUF5906 NACHT oligo_HPY Mg_chelatase RsgA_GTPase nSTAND1
Other DBs
NCBI-ProteinID: CCF12052
Position
pPANA10:complement(294492..295925)
AA seq 477 aa
MTGIVIKQVAVYAEDCIVEPVSMVIQPGKPMTLVGETGSGKSLFAQAIMGALPEGLRATG
TVEIDGQRYDLQTDLARLRALWGHRIASLPQEPGLALDPTMRVSAQVMEGYRYVRGLARR
DAQQAAAHALNHLGLAHASARFPWQLSGGMAQRVCFAAARAGGATLLIADEPTKGLDVAR
RDEMGNLLNTAVAQGETLLTITHDIALARQLGGEVMVMHKGKVVEQGSAGQVLYRPQAPY
TQLLLAADPEAWAPGSRVPCDETIVLQTEGLSLKRSGKQLFHNASLIFRAGEIVGLYGES
GCGKSSLGDTLCGLIMPDAGKVVRPGAASRLRYQKLYQDPSAIFPPDIAMVRVIDDVLRL
HHATVKRRDELMAQLGLAHALLNRPASGLSGGELQRFSLLRVMLLDPVFLFADEPTSRLD
PVVQQQTLALISELATQQRCAILLVSHDLALLEKSAHRVISLASLSQSAAIAQEVCV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgacgggcatcgtaattaaacaggtcgccgtttacgccgaagattgcatcgtcgagccc
gtgagcatggtcattcagccgggcaaacccatgacgctggtgggcgaaaccggatcggga
aaaagtctgttcgcccaggccatcatgggggcgttaccagaaggactccgtgccacaggc
acggttgagattgacggacaacgttatgatctccaaaccgatctggcccgtcttcgcgct
ctgtgggggcatcgcatcgcgtctttgccccaggaacccgggctggcgctcgatccaaca
atgcgtgtcagcgctcaggtcatggaaggttaccggtacgtgcggggtttagcccggagg
gatgcacaacaggccgcggcacacgcactcaatcatctggggcttgcgcacgcctctgcg
cgttttccctggcagctttcagggggaatggcccagcgggtttgcttcgcggctgctcgc
gcggggggcgcgacgctgctgattgcagacgagccgactaaagggctggacgtcgcgcgg
cgggatgaaatgggtaacctgttaaatacggcggtggctcagggtgaaaccttgctgacg
atcacgcacgacattgcactggcccgacagttaggtggtgaggtcatggtgatgcataaa
ggcaaagtcgttgagcagggcagcgccgggcaggtgttataccgtccacaagcgccttac
acccaactgctgttggcggccgatcctgaggcctgggcgccaggctcgcgagtaccctgt
gatgaaaccatcgtgttacagacagagggcctttctctgaaacggtcagggaagcaactg
tttcacaatgcctcgctaatcttccgggccggcgaaatcgtggggctttacggcgaaagc
ggctgcggtaaaagtagcctgggggatacgctatgcggtttgataatgcccgatgcgggc
aaggtcgtgcgtccaggggctgccagtaggttacgttatcaaaaactttatcaggatccc
tcagccatatttccacctgacatcgcgatggtcagggttatcgatgatgtgctgcggctg
caccacgccacggtgaagcgacgtgatgaactgatggcacaactgggattagcgcacgcg
ttgctgaaccgtccggcttcgggtttgtcaggcggcgagcttcagcgcttttcactgctc
agggtgatgttactggaccctgtgtttttattcgcggatgagccgacgtcgcgcctggat
cctgtcgttcagcagcagacgctggcgttgattagcgaactggccacacagcaacgctgc
gccattttgctggtcagccacgatctcgccttactggagaaaagcgcgcatcgtgttatc
tcactggcctccctcagccagagcgccgcaatagcccaggaagtttgtgtttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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