KEGG   Planctopirus limnophila: Plim_0231
Entry
Plim_0231         CDS       T01225                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
plm  Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:plm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plm03019]
    Plim_0231
   03009 Ribosome biogenesis [BR:plm03009]
    Plim_0231
   03036 Chromosome and associated proteins [BR:plm03036]
    Plim_0231
Enzymes [BR:plm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Plim_0231
Messenger RNA biogenesis [BR:plm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Plim_0231
Ribosome biogenesis [BR:plm03009]
 Eukaryotic type
  90S particles
   RNase
    Plim_0231
 Prokaryotic type
  rRNA processing factors
   Plim_0231
Chromosome and associated proteins [BR:plm03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Plim_0231
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: ADG66083
UniProt: D5SNS8
Position
complement(296512..297303)
AA seq 263 aa
MDEAAGQVPLTECEARLGYHFRSPELLMQALSHASAAKTRLESNERLEFLGDAILGAAVC
DLLFRKYPKSTEGELTRIKSFVVSRHVCGLLAKELHLDQFVIIGKGLCGTPNVPVSILSA
TFESVIAAVFLDGGFDAAKEFIIRLIEPHVEQMVGAEYGRNYKSVLQQYAQKTLGETPRY
DLLKEYGPDHLKYFKVSAALGEVVYAAAWGINKKEAEQKAAANALSELEGKPAPHSADEL
PPEIARLQASTGMNLAQEDIISS
NT seq 792 nt   +upstreamnt  +downstreamnt
atggatgaggccgccgggcaagtgcccctgacggaatgcgaagcccggctgggctatcat
tttcgctcgcccgaattgctgatgcaggccctttcacatgcctccgctgcaaaaacgcgg
ctcgaatcgaatgagcgactcgaatttctcggcgatgccattcttggtgccgccgtttgt
gatctgctgtttcgcaaatatcccaaatcgacagaaggcgaactgacacggatcaagtcg
tttgttgtcagccggcatgtctgtggtttgctggcgaaagaacttcatctcgatcaattt
gtcatcattgggaagggattgtgcggaactcccaatgtcccggtctctatcttatcggcg
acgttcgaatccgtgattgctgctgtctttctcgatggaggttttgatgcggctaaagag
ttcattattcgactgatcgagcctcatgtcgaacagatggtcggtgccgaatatggccgc
aactataaaagtgttctgcagcaatacgcccagaagactttgggcgaaactccgcgctac
gatctgctgaaggaatatgggccagaccatttgaagtatttcaaagtctcggctgcactg
ggtgaagtggtttacgctgccgcctgggggatcaacaaaaaagaggccgagcagaaggcc
gcggccaatgccttatctgaactggaagggaaaccagcgcctcacagtgccgatgaactt
ccccctgaaatcgccaggctccaggcttccaccgggatgaatcttgctcaggaagatatc
atctccagttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system