KEGG   Planctopirus limnophila: Plim_0837
Entry
Plim_0837         CDS       T01225                                 
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
plm  Planctopirus limnophila
Pathway
plm00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:plm00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Plim_0837
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:plm01007]
    Plim_0837
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:plm03016]
    Plim_0837
Enzymes [BR:plm01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     Plim_0837
Amino acid related enzymes [BR:plm01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   Plim_0837
Transfer RNA biogenesis [BR:plm03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    Plim_0837
 Prokaryotic type
   Other AARSs
    Plim_0837
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: ADG66682
UniProt: D5SSD4
Position
1073576..1075039
AA seq 487 aa
MSDTPEHLLAARLEKLERMEALGHDPWGQRFDGHMHIDAARAKAPEEKGIDGEVVRVAGR
VMRWSDSGKLRFGTIQDYTGRIQVMISKKDIAEDQWELMECFQTGDLLGVDGTLRRTNTG
EISVFATKLHVLGKSLSQPPEKWHGLQDIETLLRQRYLDLIYNDGVLARMLRRLKIIDSI
RQTLRGEEFFEVETPVLHAIAGGAAARPFITHHNALDIPLYLRIALELHLKRLMVGGIER
VYEIGRVFRNEGVDATHNPEFTMIELYQAYADYNIMMELAEKIISEACKAANDGKTVVEW
GDKTLDFTPPFQRAKYGDLFLKHAGCDMHDAAAVAEVARKLHIPTEGRHHDVIVNDVFEA
TVEDHLEGPVFVIDYPSSMCPLTKRKNGQPEIAERFELFIHGLELANAYTELNDPRLQED
LFKTQLAGLAEEDSMAKMDHDFVRALKVGMPCAGGMGIGIDRLVMLLTNTKTIRDVIFFP
LLKPEVE
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgtcagacactcctgagcatctgctggccgcccgtcttgaaaagcttgagcgaatggaa
gccctggggcatgatccctgggggcagcgtttcgatggacacatgcacattgatgccgcc
cgggccaaggcaccggaagaaaagggaatcgatggcgaagtggtgcgtgtggccggtcgc
gtcatgcgctggagtgattcgggcaagctgcggtttgggacaattcaggattacaccggt
cgtattcaggtgatgatctcgaagaaggacattgccgaagaccagtgggaactgatggaa
tgcttccagacgggcgacctgctgggggtggatggaacgttacgccgcaccaatacgggc
gaaatttctgtttttgccacgaagctgcatgtgttaggtaagagtctttcacagccgccg
gaaaagtggcatggcctgcaggatatcgagacactccttcgccagcgttatctcgacctg
atctataacgatggtgttctcgcccgtatgttgcggcgattgaagatcatcgattcgatc
cgtcaaacgctgcgaggggaagagtttttcgaagttgaaacgcctgttctgcatgcgatt
gccgggggggctgcagcacggccatttattacgcatcataatgcgctcgacataccgctt
tatctgcggattgccctcgagttgcatctcaagcgactgatggtgggcgggattgagcgg
gtttatgaaattggccgcgtcttccgtaatgaaggtgttgacgccacgcataacccggaa
ttcaccatgatcgagctgtatcaggcttatgccgattacaacatcatgatggaactggct
gagaagattatttccgaagcctgcaaggctgccaatgatggcaagacggttgtcgagtgg
ggagacaagacgctcgacttcacaccaccattccagcgggccaagtatggtgatctgttc
ctgaagcatgctggctgcgacatgcacgatgcggcggcagtggctgaagttgcccgcaag
ctgcacattcctaccgaggggcggcatcatgatgtgattgttaacgatgtctttgaagcg
accgtggaagatcatctcgaaggcccggtgtttgtgattgattacccatcgagtatgtgc
ccgctgactaagcgaaagaacggccagcccgagattgccgaacgatttgaactctttatt
catggtctcgaactggccaatgcctataccgaattgaacgatcccaggttgcaggaagat
ctgttcaagacacagctggcaggtctggcagaagaagactcgatggcgaagatggatcat
gacttcgtgcgtgctctcaaggttggtatgccttgtgcgggtggtatggggatcggtatt
gaccggctcgtcatgctcctgaccaacactaagaccattcgtgatgtgatcttcttcccg
ctgctgaagcccgaagtcgagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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