KEGG   Photorhabdus laumondii subsp. laumondii TTO1: plu2827
Entry
plu2827           CDS       T00149                                 
Symbol
holB
Name
(GenBank) DNA-directed DNA polymerase III delta' chain
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
plu  Photorhabdus laumondii subsp. laumondii TTO1
Pathway
plu03030  DNA replication
plu03430  Mismatch repair
plu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:plu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    plu2827 (holB)
   03430 Mismatch repair
    plu2827 (holB)
   03440 Homologous recombination
    plu2827 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:plu03032]
    plu2827 (holB)
   03400 DNA repair and recombination proteins [BR:plu03400]
    plu2827 (holB)
Enzymes [BR:plu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     plu2827 (holB)
DNA replication proteins [BR:plu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     plu2827 (holB)
DNA repair and recombination proteins [BR:plu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     plu2827 (holB)
SSDB
Motif
Pfam: DNApol3-delta_C DNA_pol3_delta2 HolB_lid
Other DBs
NCBI-ProteinID: CAE15201
Pasteur: plu2827
UniProt: Q7N392
Position
complement(3357663..3358652)
AA seq 329 aa
MNWYPWLNQAYRQLVESHQQGRGHHALLVHANAGTGADVLIYGLSRWLMCRNRQGMKSCG
KCHSCHLMMAGTHPDWHIMSPEKGKTSVGVEAVRQITEKLYSRSQQGGVKIVWLPLTECL
TDAAANALLKTLEEPPKHTYFLLECRQPSSLLATLRSRCFYYFLPVPKTESSLYWLQKQL
PLISSVDAMTALKLSQGAPVAAEQLLQPEQWQIREQFCQAVKQALDKHDALSLLPQLNHE
NAPQRLHWLISLLFDAVKWQQQLQRYCINQDQQTLIYQLSSMHTLAVLLQGVDDWMSCRH
QLLSVVGVNWELLLVEQLLNWEKQFTSSP
NT seq 990 nt   +upstreamnt  +downstreamnt
atgaattggtatccttggcttaatcaggcatatcgtcagttggtggaatctcatcagcaa
gggcgaggccatcatgctttattggttcatgctaatgcaggtactggggccgatgtgttg
atctatggattaagccgatggttaatgtgtcggaatagacaggggatgaaaagttgtggg
aagtgtcatagttgtcacctgatgatggcaggaactcatcctgattggcatattatgtcg
ccggagaagggcaaaaccagtgttggtgtggaagcggtacggcaaattacggaaaagctc
tatagccgttctcagcaaggtggggtaaaaattgtttggttacctttgaccgaatgtctg
accgatgctgctgccaatgcattattaaaaacgttggaagagccaccgaaacatacctat
tttcttttggaatgtcggcagccgtccagtcttttggctactttacgcagccgctgtttt
tactattttctgccggtacctaagacggaaagtagcctttactggttgcaaaaacagttg
cctttaatttcttcggtcgatgcaatgaccgcgttgaaactgtctcagggagcgcctgta
gcagcagaacaattgttgcaaccggagcaatggcagatacgggagcagttttgccaggct
gttaaacaggctttggataaacatgatgctttgtcacttttaccccaactgaatcatgaa
aatgcgccacaacgccttcattggcttatcagtttgttatttgatgcggtgaagtggcaa
cagcagttacagcgttattgtatcaatcaggatcaacaaacgctgatttatcaattgagt
tccatgcataccctggctgttttacttcaaggcgttgatgactggatgtcttgtcgtcat
cagttgctttcagtcgtgggcgtaaattgggaattgttactggtagaacagttgctcaat
tgggaaaaacagtttacttcatcaccctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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