KEGG   Papilio machaon (common yellow swallowtail): 106721653
Entry
106721653         CDS       T05138                                 
Name
(RefSeq) probable ATP-dependent RNA helicase spindle-E isoform X1
  KO
K18408  ATP-dependent RNA helicase TDRD9 [EC:5.6.2.5]
Organism
pmac  Papilio machaon (common yellow swallowtail)
Brite
KEGG Orthology (KO) [BR:pmac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pmac03036]
    106721653
Enzymes [BR:pmac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.5  RNA 5'-3' helicase
     106721653
Chromosome and associated proteins [BR:pmac03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    106721653
SSDB
Motif
Pfam: TUDOR Helicase_C DEAD HA2_C AAA_19 AAA_11 Herpes_ori_bp ResIII PhoH
Other DBs
NCBI-GeneID: 106721653
NCBI-ProteinID: XP_014372146
Position
Unknown
AA seq 1444 aa
MEELRSFFNNPCPSNAQVKKLRGPITGGRRITKEDTINELNKPEQHRHSVLASGTDYAEA
IKKKEMENYLKYEGNRDTFQSFAGGLDSLEQLSSYSYSMQNIEALTEEAMNEVYKKYSFQ
RKEDTNNLAINEYRQQILSSISAYPVVIIEGPTGCGKTTQVPQWILDDSFENRRPCKIVV
TQPRRIAAISIAKRVAQERGWDVSGVVGYQVALEAKVSSDTRISYVTTGILLQKLVSAKN
MNEYTHVILDEVHERGQEMDFLLLVVKRLLYTVSPHVKVVLMSATINRKTFADYFMIPTP
MGLQTAISIKVVKKDPMFTVKTFYLNHLNKFGSILDKITSSKNESPGIPSEMHHLVIKLI
DAFEQIDEKEENFACRSEADLPSVLIFLPGINEIEELYDCLTNSELRSKMSEKTGTSKTK
WWVLPLHSTITADEQVRVFQRAPPGQRKIILATNIAESSITVPDIKYVIDYCLMKVLVAD
TATNFTSLQLSWAAKANCEQRAGRAGRVRDGRVYRLVLERFYNDLPDECPPEIVRCPLER
LVLLAKMLDMGPPSDILALAMDPPDMSNIHKTMLVLKEVGGMKKTINDEWCVSDGDITYL
GRIMAKLPLDVRISKLIMLGYIYGCFDESIIMAAAMSVKNVFNSPFREKLNAYNSKLTWA
DGSTSDCIAFLNVYKVWNHLRKLNYFKQPGSEGQWARRFYVQVRALRELDDLVRELRVRL
SREGLDTNAVPSPWAKHEITLVLKLIIAGAFYPQYFVHASTDECREREAVRVLGGLNPRR
SLYFTGWPTHQPLAPYAPAIRNTVRRLLGDDPRVSFDVGSRKIFLTFSDGSDETKSTEKT
GDPTIPGQVVLPVYKAVKARQIRTDFRIPLLPIEKANELAAAHERANTIIDLDKMVPRLP
EIDDTHFPLKLSQYISVSKFWVQYDDESTVAELREIEAALNRGTLLASAGGEKPGVLRAA
PYVSAAGTAFYRARIVNTLPRDMLEVLYIDYGSYGRVSTCSVRELPAGVCSNTPPLAMRC
SLTGVAPAPLLDHHAHWTPAADHLFTTLITRGRLLGKVYSVVNGVVSIELFAEHGKTSVN
KALLDKGLAVPCEESYESKLNHDVREMANGLNMVQKRAYNKEQIEAAFYHMNEIDPPNYK
ECDTDVCLKGPFSPLEISVHNLMYAGREKQVNIEWNSVNSVLLDTEPQEIYERLLVAAQV
GQNEMGSTLTLHHTTLMPNIPGLPAIIALLFCPAAELRRDERCTRYVSTLCGLGSHDDGR
PYFPEHDILVNIDVDLDVDDIGLINHVRHLMDYMMFCSEGQDTPTADDEFHPKVPKFIRE
DIMKLLRKRRKHREPCCVANAWCWRSADESELLEISVPGMAERALVFSLHRPLELHATPR
TDLLRLHAANQALYHMLARTSSSSSQELTCELCNTGPLPAPAMRIHLYSNMHLEKEDDLR
DVQS
NT seq 4335 nt   +upstreamnt  +downstreamnt
atggaggaactgcggtcttttttcaataacccatgtccgtctaatgcacaagtaaaaaaa
cttcgaggtccaattactggtggtagacgaataactaaagaagatacgataaatgaactg
aataaacctgaacaacatcgtcactctgttctcgcgagcggcactgattatgcggaagca
attaaaaaaaaagaaatggaaaattatttgaagtatgaaggtaacagagacacattccaa
agttttgctggtggactggattctttagagcagctatcttcgtatagctattcaatgcag
aacattgaggcacttacagaggaagcaatgaatgaagtgtacaagaaatactcattccag
agaaaggaggatacaaataatttagcaattaatgaatacagacagcagattttaagtagc
atctcagcttatccagtggttattatagaaggtccaactggttgtggtaaaacaacacaa
gtaccgcaatggattttagatgattcatttgagaaccgtaggccgtgcaaaattgttgtc
acccagccgagaagaatagcagctatttctattgcaaaaagagttgctcaggagagaggt
tgggatgttagcggtgtagttggatatcaggttgcattggaagccaaagtgtcatctgac
actcgtattagttatgttacaactggtatacttctacaaaaacttgtttcagccaagaat
atgaatgaatatactcatgtaatattagacgaagtgcacgagcgtgggcaggaaatggat
tttctcctgcttgtagtaaaaagactcctgtacacggtatcaccacatgtgaaagtggtg
ctcatgtctgctacaatcaaccggaagacttttgcggattactttatgatacctactcca
atggggttgcagacggccatatctattaaagttgttaaaaaagatccgatgtttaccgtg
aaaaccttttatcttaatcatcttaataaatttggatcgatactggataaaattacatca
tcaaagaatgaatcaccaggaatcccttcagaaatgcatcatttggtgatcaaattgata
gatgcttttgaacaaattgatgagaaggaagagaactttgcttgcagatcggaagctgat
ttaccatctgttttgatatttttacctggtattaacgaaattgaggagttatatgattgt
ttgacaaattccgaattgagatcaaaaatgtcagaaaaaacaggtacatcaaagacgaaa
tggtgggtgctgccgctgcactcaacgatcaccgcagacgagcaagtgcgtgtgttccag
cgtgcgccacccggacagcgcaagatcatacttgccaccaacatcgctgagagctccatc
accgtgcctgacatcaaatatgtgatcgactactgcctaatgaaagtgttggtggcggac
acagcgaccaacttcacatcgctgcagttgtcgtgggcggccaaggccaactgtgaacaa
cgcgcaggtcgcgcaggacgtgtgcgcgacggacgcgtctatcggctagtcttggagagg
ttttataatgacttgccggacgagtgtccgccggagatagtgcggtgcccgctggagcgg
ctggtgctgctcgccaagatgttggacatgggcccgccgagtgacatcctcgcgctcgcc
atggacccgccagatatgtccaatatacacaaaactatgttagtgctcaaagaggtgggt
ggtatgaagaagacaataaatgatgagtggtgtgtgtctgacggtgacatcacatacctg
ggccgcatcatggccaagctgcctctggatgtgaggatctccaagctgattatgctgggt
tacatctacggatgtttcgatgaaagtattataatggcggcggccatgtcagtgaagaac
gtattcaacagtccgttccgtgagaaactaaacgcttacaactccaagctgacctgggct
gatggatcaaccagtgattgtatcgccttcctcaatgtttataaggtgtggaaccatctg
cgcaagttgaactacttcaagcagccgggtagcgagggtcagtgggcgcggcggttctac
gttcaggtgcgggcgctgcgggagctggacgacctcgtgcgggagctgcgcgtgcgcctc
tcgcgtgagggcctcgacactaacgccgtgccctcgccatgggccaagcatgagatcaca
ttggttcttaaactgataatcgcgggtgcattctacccgcaatacttcgtgcacgcgtct
actgacgagtgccgtgagcgcgaggctgtgcgtgtgctgggcggcctcaatccgcgccgc
tccctctacttcaccggctggcctacacaccagcccctcgcaccatacgcacccgccatc
cgcaacaccgtgcgccgtctactcggtgatgatcccagggtcagctttgatgtcggcagt
aggaaaatattcctaacattctctgacggaagtgatgaaactaaatccactgaaaaaact
ggggatcctacaattcccgggcaagtggtcctacctgtatacaaagctgtcaaggcacga
caaatacgaaccgactttcgtatacctcttttgcctatagaaaaagctaatgaattggca
gcggcgcacgagagagccaacacgatcatagacttggacaagatggtgccgcgactaccg
gaaattgatgacacgcacttccctctcaaactgtcgcaatacatatccgtgagcaagttc
tgggtgcagtacgacgatgagtctactgtagcggagctgcgtgagatagaggcggcgctg
aaccgcggcacgttgctggccagcgctggtggtgagaaacctggcgtacttcgcgcagca
ccatacgttagtgcagccggtaccgcattctaccgcgctaggattgtaaacacactaccc
agggatatgctcgaggtgttgtacatcgattacggcagctacggtcgtgtgagtacatgc
agcgtgcgcgagctgcctgcgggcgtgtgcagtaacacgccgccgttggccatgcgatgt
tcgctgacgggagttgcgcctgcgccgcttctggatcaccacgcgcactggacaccggca
gcagaccatctcttcacaacgctcatcacacgcggacgtctgctcggcaaggtgtattcg
gtagtgaatggcgtggtatcgatagagttattcgcagagcacggcaagaccagcgtaaac
aaggcactcttagacaaaggactcgctgtaccttgtgaggaaagttatgaatctaagtta
aatcatgacgtaagagagatggcaaatggtttgaacatggttcagaagcgggcttacaac
aaagaacagattgaggccgcgttttatcatatgaatgaaatagacccacccaattacaaa
gaatgtgatactgatgtctgcttgaaaggacccttcagtccattggaaatcagcgtacac
aatctgatgtacgcaggtcgggagaaacaggttaacatcgagtggaattctgtcaactct
gtactgttagatactgagccgcaggagatttatgaaaggttattagtagccgcccaagtg
ggtcagaacgagatgggtagcacgctgaccttgcaccatacaaccctgatgccgaacata
cctggcctgcccgctatcatagcattgctcttttgtcctgccgctgagttgagacgcgac
gagcgctgcacgcgctatgtgagcacgctgtgcgggctgggcagtcatgacgacggccgt
ccgtacttccccgagcatgacatacttgtcaatatcgacgtcgatctggatgtcgatgac
atcggcttgatcaaccacgtgcggcacttgatggactacatgatgttctgcagcgaggga
caggacacacccaccgctgatgacgagttccatcctaaagtacccaagttcatacgagag
gatatcatgaagttgctgcgcaagcgacggaagcaccgagagccatgctgcgtggctaac
gcgtggtgctggcggtcagcagacgagagtgagctgctggagatcagcgtgcccggcatg
gcggagcgcgcgctcgtcttctccctgcaccgcccgctggagctgcacgccacaccccgc
actgacctgctgcgactgcacgccgccaaccaggccctgtaccacatgctcgccaggaca
tcgtcgtcgtcaagtcaggagctgacgtgcgagctgtgcaacacgggccctctgcccgca
cccgccatgcgcatacatctctactccaacatgcacctggagaaggaggacgacctgcga
gatgtgcagtcctaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (54)   

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