KEGG   Prauserella marina: BAY61_29020
Entry
BAY61_29020       CDS       T04988                                 
Name
(GenBank) DNA polymerase III subunit delta'
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
pmad  Prauserella marina
Pathway
pmad03030  DNA replication
pmad03430  Mismatch repair
pmad03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BAY61_29020
   03430 Mismatch repair
    BAY61_29020
   03440 Homologous recombination
    BAY61_29020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmad03032]
    BAY61_29020
   03400 DNA repair and recombination proteins [BR:pmad03400]
    BAY61_29020
Enzymes [BR:pmad01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BAY61_29020
DNA replication proteins [BR:pmad03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BAY61_29020
DNA repair and recombination proteins [BR:pmad03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BAY61_29020
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_22 AAA_16 AAA_5 Mg_chelatase DNApol3-delta_C
Other DBs
NCBI-ProteinID: ASR38376
UniProt: A0A222VWM4
Position
complement(6295532..6296725)
AA seq 397 aa
MSGPVWSQVVGQDRAVEMLSAAVTSAAALVSGESTDSGAMTHAWLFTGPPGSGRSVAART
FAAALQCRLGLGCGECAGCRTALAGTHADVRLVVPEGLSISVAEMRALVQAAARRPTTGR
WQVVIIEDADRLTEGAANALLKAVEEPPERTVFLLCAPSDHPEDVSVTIRSRCRLVTLRT
PQPDAIAAVLIERDGVAEDMARWAAAVCGGHVGRARRLATDEDARRRRAAVLRIPLGLRR
AADVFDCADELIKTAEADASVESKVKDEAEQDALRTAMGSGGTGKGVAAAKRSADAAVRQ
LEKRQKSRATRTQRDTLDLALVDLAGFYRDVLVTASGAEATLNHPDRADDSATAAAQWTP
ASTLRRLDAVLACRDAIGWNVKPRIAVEAMVTTLREG
NT seq 1194 nt   +upstreamnt  +downstreamnt
gtgagcggtccggtgtggtcgcaggtcgttggacaggacagggccgtcgagatgctgagc
gccgcagtcacgtccgcggcggcgctggtgtcgggtgagtcgaccgactcaggagccatg
acccatgcctggctgttcacgggccctcccggatcgggaaggtcggttgccgccaggacg
ttcgcggcggcgttgcagtgtcgtctcggcctcggctgcggtgagtgcgcgggatgccgg
acggcactcgccggtactcacgccgatgtgcggctcgtcgttccggaggggctttcgatc
tccgtcgccgagatgcgtgctctcgtgcaggccgccgctcgcaggccgacgacgggccgg
tggcaggtcgtgatcatcgaggacgccgaccggctcaccgagggcgcggccaacgcactg
ctcaaggcggtcgaggaaccaccggaacgcactgtctttctgctctgcgccccttccgat
cacccggaagacgtttcggtgaccatcaggtcgaggtgcaggctcgtcacgctgcgcact
ccccagccggacgccattgccgcggtgctcatcgagcgggacggcgtcgcagaggacatg
gcgcgatgggcggctgccgtctgcggcggtcatgtcggaagggcacggaggctggccacc
gacgaggacgcccgcaggcgccgtgcggccgtactgcgcatcccgctcggtcttcgcaga
gcagccgacgttttcgactgcgccgacgagctgatcaagacggctgaggccgatgcctct
gtcgagagcaaggtgaaggacgaggccgagcaggatgccctccgcaccgcgatgggttcc
ggtgggacgggcaagggcgtcgccgcggccaagcgatctgccgacgccgcggtcaggcaa
ctggagaagcggcagaagtcgagagcgacgaggacccagcgcgacaccctcgatctcgcg
cttgtcgatctcgccggtttttaccgggacgtactggtgaccgcgagcggcgcggaggcg
acgctcaaccatcccgaccgggccgacgacagcgcgaccgccgccgcgcagtggacacct
gcctccacgttgcgtcgcctcgacgcggtactcgcctgtagggacgcgatcgggtggaac
gtcaagccgagaatcgcggttgaagccatggtgaccacgctgcgcgagggctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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