KEGG   Parus major (Great Tit): 107202017
Entry
107202017         CDS       T04864                                 
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
  KO
K05769  Rho guanine nucleotide exchange factor 4/29
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    107202017 (SPATA13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmaj04131]
    107202017 (SPATA13)
Membrane trafficking [BR:pmaj04131]
 Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    107202017 (SPATA13)
SSDB
Motif
Pfam: RhoGEF PH SH3_1 SH3_9 SH3_2 PH_5
Other DBs
NCBI-GeneID: 107202017
NCBI-ProteinID: XP_015477693
Ensembl: ENSPMJG00000017500
Position
1:69682024..69750663
AA seq 1273 aa
MTTFPNGCGNGTTVTCIVMDNKEPQNQTTCASHNGGHSTSNSPEEEFQEDKLSPSKIMRF
FTTPRKRANSSSDRPRSLVLMGNSSTWNAFSSIRKMGSFKKLKSSVQQGIQARECSDISN
ENSIGKHGSNGAVVRVQTNRYSYSGPLHDFQNAVDGLASDCSDVEESDESFLRNTHRSRS
IRRAYGAGRINLLDTDKVQSHHNCVRPTSPVIAEPKICEIFVKDSENNRIIYWRSRSSDN
LNFLKKSSFKRKSTSNLADLKVANEKQMPARTVSVASADSDKSGGNPERRSKRWKSPIRA
KDFDRVLKFVSNVTDVARKKDGPKNTSPSPSELSQRTRSNSRLHDDYSRRVSSSTDHDRK
RCASSVSSPDSSLPGTPCLQSPVIAQDKEAEMNVAVTEDKSLRTSSGIPDSDSFSPTLND
ISPFPNEVFYSDSDEPKATQQCTDEDENLHLPVRPTTPKPQSPTTGKVKCSMNFQCPNHH
STLSLSSSESEERVEVPGLKLGRNPVCFQDSVQTVYYDDGNEDSGISSHSQLSLNLASGT
EEKKEEVVSDDHWKRSTSQDEEKADSQKVTPRKWGSGKRSRPRPLSDYGQMSVRSFSIPE
DAVAVESQKTDCTDGENQPGLASVGSVIQSNTVGYHRGRKRRPISVIGGVNFYGDDQVEE
RENLLTQPVARPPVPAHKVPPYKAVSARFRPLTFSQSTPIGLDRVGRRRQMRTANVAADG
GTESSALVDDNGSEEDYSFEELCQAAPRYLQPGGEQLAINELISDGTVVYAEALWDHVTM
DDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEEVPENCSNIQDEE
QDSDISKHRQKIAENRDQMRTNVIQEIMKTERVYIKHLKDICEGYIRQCRKHTGMFTTAQ
LSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPSA
CIELSKLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEH
SDYSNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWEGPDVLARSSELIHSGE
LTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRIDMDETEVVDTEDGRDKDFN
INVKNAFKIINRTTEEIHLFCAKKQEDKKRWMEACESERRRVREDKEMGMEISENQKKQA
MQNARKSRQGKIKGVSYNGCPVPPPHQTLHPLHQRHITVPTSVPQQQVFALAEPKRKPSL
FWHTFNKLTPFKK
NT seq 3822 nt   +upstreamnt  +downstreamnt
atgacaacatttccaaatggctgtggaaatggtaccaccgttacttgtatagttatggat
aataaagagcctcaaaaccagactacctgtgccagtcataatgggggacacagcactagc
aacagccctgaggaggaatttcaagaggataagctcagcccttccaaaatcatgcgcttt
ttcaccactcctcggaaacgggctaattccagctctgacaggcctcgttctctggttttg
atgggcaactcatccacgtggaatgccttttcttctatcagaaagatgggatctttcaag
aagttgaaatcttcagttcaacaaggaattcaagcaagggaatgctcagacatctcaaat
gagaacagcataggcaaacatggttcgaatggagcagtggtgcgagttcagactaacaga
tattcctattcagggcctctgcatgatttccagaatgcagtggatggtttagcttctgac
tgctcagatgtggaggagagcgatgagtccttcctgaggaacactcaccgctcacgcagc
atcaggcgggcttacggtgctggtcgcataaacctgctggacacagataaagttcagagt
caccacaactgtgttaggccaacatcacctgtcatcgcagagccaaagatctgtgaaatt
ttcgtgaaagactctgaaaacaacaggatcatttattggagaagcagaagttcagataat
ttgaactttctgaagaaaagctcattcaaacggaagtccacctcaaaccttgctgatctg
aaggttgcaaatgaaaaacagatgccagcaaggactgtgagtgttgcctctgctgactct
gacaaaagtggtggaaaccctgagaggagatccaagcgatggaagagccccatcagagca
aaggattttgacagagttttgaaatttgtcagtaatgttacagatgttgcaaggaagaag
gatggccccaagaacacgtctccttctcccagtgagctgtcccagagaacaaggtctaac
agcaggctgcacgatgactactcccgcagggtttccagcagcacggatcatgacaggaag
agatgcgcctcctcggtatccagtcctgactcttccttgccaggaacaccttgcctgcaa
agccctgtgattgctcaggataaggaggctgaaatgaatgtagctgtcactgaagataaa
agcctcaggacgtcatcaggtatcccagattctgatagcttttcacctactctgaacgac
attagtccatttcccaatgaagtcttttattcagactcagatgaaccgaaagctacccag
cagtgtacagatgaagacgaaaaccttcaccttccagtcaggccaacaactccaaagcct
caaagtccaactacagggaaagtcaagtgcagtatgaatttccagtgtccaaaccatcac
agcacgttgtcgctgagctcatcggagagtgaagagagagttgaggtaccggggctgaag
ttgggcaggaatcctgtttgcttccaagactcagtgcagactgtgtactatgatgatgga
aatgaagatagtggcataagcagccactctcagctgagcctaaatttagcctctggtact
gaagagaaaaaggaagaggttgtttctgatgaccactggaagaggtccacgtcccaggat
gaagaaaaggcagactcacaaaaggtcacacccaggaaatggggctctggaaaaagatcc
cggcccagacctctctcagactacggccaaatgtcagtccgaagtttctctataccagaa
gatgcagttgcagtggagtctcagaagacagactgcacagatggagaaaatcagccagga
ctggcatctgttggttctgtgatccaaagcaatactgtaggctaccacagagggcgaaaa
agaagacccatctccgtaataggtggggtcaatttctatggagacgatcaagtagaagag
agagaaaatctgctgacacaacctgtggcacggccacccgttccagcacacaaggtgccc
ccgtacaaggctgtttcagccaggttccggccactcaccttctctcaaagtacccccatc
ggcctggaccgggtgggacggaggcggcagatgagaacagctaatgttgctgcagatggt
gggactgaatcttcagccttagtggatgacaatggcagtgaggaagattacagcttcgag
gagctctgccaagctgctcccaggtacctgcagcccggaggggagcagcttgcaattaat
gagctgataagcgatggcaccgtcgtctatgcagaggctctgtgggaccatgtcactatg
gatgatcaagagctgggcttcaaagctggagatgtcattagagttctagaagcttccaac
aaagactggtggtggggaagaaatgaggacaaggaagcctggtttccagccagctttgtc
aggctgcgagttaatcaggaagaagtgccagaaaattgtagtaatatccaggacgaagaa
caagattcagatattagcaagcatcgccagaaaatagctgaaaacagggatcagatgaga
accaacgttatacaggaaattatgaaaacagaacgggtctatatcaagcatctcaaggac
atctgtgagggttacattcggcagtgtcgcaaacatacaggaatgttcaccacagctcag
ttaagcaccatttttggaaatattgaagatatttacaagttccaaaggaagtttctgaag
gatcttgagaaacagtacaacaaagaagaacctcatctaagtgaaatagggtcatgtttt
cttcaacatcaagaaggctttgctatttattcagagtattgtaacaatcatcccagtgcc
tgcattgaactctccaaactgatgaagcagggaaaataccgccacttctttgaggcctgt
cgcttgcttcagcagatgattgacattgccattgatggttttctgctcactcctgttcag
aaaatctgcaaatatcctctgcagcttgcagaattgctcaaatacaccactcaggagcac
agtgattatagcaacataaaagctgcatatgaggccatgaagaatgtggcatgcctgatc
aacgagcgaaaacggagactagaaagcatagacaagattgcacgttggcaagtctctatc
gtagactgggagggaccagatgtgctagccagaagctcagaactgatccactcaggagaa
ctgaccaaaatatcaaaacaaggcaaaagccagcagaggactttcttcctttttgaccat
cagcttgtcttctgtaagaaggacttgctgagaagggacatcttgtattacaaggatcgt
attgacatggatgagacggaagttgtggacactgaagatggtagagacaaagactttaac
atcaatgtcaagaatgcttttaagataataaacagaacaacagaagagattcatttgttc
tgtgcaaaaaaacaggaggataaaaagagatggatggaggcatgtgaaagtgaaaggaga
agagttcgagaagacaaggaaatgggtatggaaatctcagaaaaccagaagaaacaagca
atgcagaatgcccgtaagtcaaggcaaggaaaaattaaaggtgtgagctataatgggtgt
ccagtgcctcctccacaccaaaccctgcatccccttcaccagcgacacatcaccgtgcct
accagcgtcccacagcagcaagtctttgccctggcagaacccaagcggaagccatccctc
ttctggcataccttcaacaaactcactccctttaaaaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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