KEGG   Parus major (Great Tit): 107204470
Entry
107204470         CDS       T04864                                 
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X3
  KO
K02084  apoptotic protease-activating factor
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj04115  p53 signaling pathway
pmaj04210  Apoptosis
pmaj05164  Influenza A
pmaj05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    107204470 (APAF1)
   04115 p53 signaling pathway
    107204470 (APAF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    107204470 (APAF1)
   05168 Herpes simplex virus 1 infection
    107204470 (APAF1)
SSDB
Motif
Pfam: WD40 NB-ARC APAF1_C APAF-1-like_WHD ANAPC4_WD40 NBCH_WD40 CARD eIF2A RMC1_N WD40_like CARD_2 Ge1_WD40 Nup160 WDR54 AAA_16 DUF2415 AAA_22
Other DBs
NCBI-GeneID: 107204470
NCBI-ProteinID: XP_015483125
Ensembl: ENSPMJG00000012940
Position
1A:44274868..44317905
AA seq 1249 aa
MDVKSRNYLLMNRQALENDIKTSYIMDRMIADEVLTLQEEERVKQQNTRKERAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAVSSGNRKSSMDGMTSYVKTILCEGGVP
QRPVVFVTRPKLVDAIKKKLYCLGSDPGWVTVYGMAGCGKTVLTAEALRDPQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHESTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGIKYEVHVESGLAHEKGLEILSLFVN
MKISELPEQANCLVRECKGSPLVISLIGALLRDFPSRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLDDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVLSQEDC
MYWYNFLAYHMAGAQMQQELHDLMFSLDWIKAKTELVGPAHLIHEYVEYSSILDQKDSTV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRETGTFYLEWINKRS
LKNLYRLVVRPHRDAVYHACFSKDRQRIASCGADKTLQVFKAESGERLLEINAHDDEILC
CAFSADGEFVATCSSDKKVKVWNSRTGQCRCVYEEHSEQVNCCQFNNKSGQYLLATCSSD
TYIKIWDLNKKYCRNTMIGHENSVNHCRFSPDDEYVASCSTDGTVKLWEARSGNELKSIE
IKDFFRNADEQSDDVEVLVKCCSWSRNGNMLLVVAKNKLLLFDINTCGLLTQVIVSHHST
IQYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSSD
DQTIRIWETKKVCKSSDAVLKSELDVVFYNGEVMILAIYNQKNLQLINGNTDNVIMQTAA
QESPISCCCLSEDLKFAAFGQENGTIKVLELSDGKVLKSWEAYRTSVQHCRFTPDCQTLI
SSAHDSVIQVWNWQLSECVFLRGHKEAIKDFRLLEDSKLLSWSFDGTVKVWNVTTGNPER
DFACHGGAVLSCAVSPDGSKFSSASADKTAKIWSFESSSALHELKGHEACVRCCTFSPNN
KLLATGDDKGEIRIWDVLTGALLHFCSPVTVDEGEPTHGGWVTDLSFSPDNKMLVSSGGY
LKWWNVTTGESLQTFYTNGTNLKSIHVSPNFKVYVTVDNLGILYVLQKF
NT seq 3750 nt   +upstreamnt  +downstreamnt
atggatgtcaaaagtagaaactatttgctgatgaatcgtcaagcactggaaaatgacatc
aagacttcttatatcatggatcgtatgattgctgatgaagtgctaacattacaggaggag
gagagagtgaagcagcagaatacacggaaggagcgagcagctatgctaataaacattatt
cttacaaaagataataattcatatagatccttttataatgcactgctccatgaagggtac
agagatcttgctgcacttctccaggacggcatccctgctgtctcatctggtaacagaaag
agttcaatggatggaatgacttcttatgtgaagaccattctctgcgaagggggtgtgcca
cagagaccagttgtgtttgtcactcgaccaaagctcgtagatgctattaaaaagaaactg
tactgcttgggaagtgatccaggctgggtcacggtttatggaatggcaggctgtgggaag
actgttttgacagcagaagctttaagggatcctcagctcttggaagattactttccagga
ggagttcactggatctctgttgggaaacaggacaaagcagggctcctcataaaacttcag
aatctctgtagtagattggaacatgagtccactctttcacaaagaccaccacttaacatt
gaggaggctaaagatcgtcttcgtttgctgatgttacgcaaataccccaggtctcttttg
gtcctggatgacatttgggattcctgggtgttaaaagcattcgataatcaatgtcaggta
ctcatcacgagcagggacaggagtgtaacagatgctgtggctggcattaaatacgaggtt
catgtggaaagtgggctagcacatgagaaaggactggagattttatccctatttgtgaat
atgaaaatatcagagcttccagaacaagctaactgtcttgtaagagaatgcaaaggttct
cctcttgtgatatccttgataggtgcattactacgagacttccctagccgctgggaatac
tatctcaggcagctgcagaataagcagtttaaaagaataagaaaatcttcctcgtatgat
tacgaagcccttgatgaagcaatgtccataagtgttgagcaactggatgacaattacaaa
gactactataaagacctctctatcctcccaaaagatgttaaagtacctactaaggttctc
tgtattctttgggatatggaaactgaagaggttgaagatatactacaggaatttgttaac
aaatcactgttgttctgtgatcggaatgggaagtcattccattattatttacatgatctt
cagcttgactttctcacagagaagaatcgcaaccagcttcaggagctacataaaaacata
gtaaatcagtacaagaaatactacaagcttaatacacctgttctgtctcaagaggattgc
atgtattggtataacttcctagcatatcacatggcaggtgcccaaatgcaacaggagctc
catgatcttatgttttctttggattggattaaagctaaaacagaattggtagggcctgct
catctgattcatgaatatgtagaatatagttcaatcctggatcaaaaggatagcacagtg
cgtgagaatttccaggaatttctgtctttaaatgggcaccttcttggacggcagccgttt
cctgacatcattcagctgggtctttgccagccagagacgtcagaggtgtatcaacaggcc
aagctgcatgcccaaagggaaacaggaacattttatttagagtggataaataaaagatcc
ttgaaaaatctctaccgtctggttgttcgtccacacagagatgcagtttaccatgcctgc
ttttctaaggatagacaaagaatagcatcatgtggagctgataaaacacttcaggtgttt
aaagcagaaagtggagagagactcctggagataaatgcccacgatgatgaaatactctgt
tgcgctttttctgcagatggtgaatttgtagcaacttgttcgagtgataaaaaagtgaag
gtctggaattcaagaacaggccagtgtaggtgtgtatacgaagaacactccgagcaggtc
aactgctgccagttcaataacaaaagtggtcagtaccttctggccacctgctccagtgac
acttacatcaaaatttgggatttaaataaaaaatactgtagaaatacgatgataggtcat
gaaaattctgtcaatcactgcagattttcaccagatgatgaatatgttgctagctgctca
acagatggaacagtaaagctttgggaagcacgctcaggaaatgaactgaaaagtattgag
ataaaagatttcttcagaaatgcagatgagcaatcagatgatgtggaggttttagtaaaa
tgctgctcttggtccagaaatggtaacatgcttttggtggtagccaaaaacaagcttttg
ctttttgatatcaacacctgtggtttgttaactcaagtcattgtcagccatcacagcaca
atccaatactgtgacttctgtcctggggatgagttagtagcagttgctttgtctcactgc
tctgttgagctgtggaatattaagtctttatcaaaagtggcatattgcagaggacacatg
agctgggttcactgtgtgacattttcaccagatggatctttatttctgacttcatctgat
gaccagacaatacgtatctgggaaacaaagaaggtgtgcaaatcttctgatgctgtgctg
aaaagtgaactagatgttgtattttacaatggtgaagtgatgattttagccatctacaat
cagaagaatttacaacttatcaatggaaatacagacaatgttattatgcagacagcagcc
caagagtctcccatttcctgctgttgcttaagtgaagatcttaaatttgcagcttttggg
caggagaatggaacaataaaggtactggagttgtcagatgggaaagttctgaagtcctgg
gaggcctacaggacatcggtgcagcattgtcgatttacacctgattgtcagactctcatc
tcgagtgctcatgattcagttatacaggtatggaattggcagttgagtgagtgtgtgttt
ctaagagggcacaaggaagcaatcaaggatttcagacttctggaagattccaaacttctc
tcttggtcgttcgatggaaccgttaaggtttggaatgtcactactggaaatccagaaaga
gattttgcttgtcacggaggtgctgttctttcctgtgctgtttcacctgatggtagtaaa
ttttcatctgcttctgctgacaaaactgcaaagatatggagctttgaaagttcatctgct
cttcatgaactgaaaggccatgaagcctgtgtgcggtgctgtactttctctcctaataac
aaactgttggccactggagatgacaaaggagaaataaggatttgggatgttttaactggt
gcattacttcacttctgctccccagttactgtagatgaaggagaaccaacacatgggggt
tgggtaacagacctctccttttctcctgacaataaaatgcttgtgtcatctggaggctat
cttaagtggtggaatgtaactactggagaatccttacaaaccttctacacaaatggaaca
aacctcaagtcaatacatgtgtcccctaatttcaaagtatatgtgactgttgataatctt
ggtattctttatgtattacagaagttctga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (17)   
   Pfam (17)   
All databases (46)   

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