KEGG   Parus major (Great Tit): 107211828
Entry
107211828         CDS       T04864                                 
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
  KO
K13174  THO complex subunit 5
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107211828 (THOC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmaj03019]
    107211828 (THOC5)
   03041 Spliceosome [BR:pmaj03041]
    107211828 (THOC5)
Messenger RNA biogenesis [BR:pmaj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107211828 (THOC5)
Spliceosome [BR:pmaj03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107211828 (THOC5)
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 107211828
NCBI-ProteinID: XP_015499834
Ensembl: ENSPMJG00000018900
Position
15:complement(12190472..12203392)
AA seq 710 aa
MSSESSKKRKPKVIRTDGVPAEGKRGKGDTDQETQTLLWRVSTKLEDPSGICMVPSKPPD
VRYYSEESEVDLRDPIKDYELYRETCQELQRLMAEIQELKSRGIKENASEIDERRVQSCV
HFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSK
HEEIELVSLEEFYKEAPPEISRPAITLTEPHQQTLARLDWELEQRKRLAEKYKECLTSKE
KILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFV
QASAYGQACDKKLVVAIEGSVEEAKALYKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQL
DDKRKEMLKRHPLSVTLDLKCKDENVLHLTFHYLMNLNIMTVKAKVTTAMEMTTAISAGD
LLSPDSLLNCLYPGDHGRKTPNPANQFQFDKVGILTLSDYMTELGHPYVWVQKLGGLHFP
KDQPQHTVAADNSLSASHMELTVKLLRSRLQSRLALHKQFASLEHGVVPVSSECQQLFPT
KIVSRLVKWTAIPYEDYAELPYTKDVIEAGLAEDTHLYYMALIERGTAKLQAAVVLNPGY
STLPPVFSLCLNWKGERNSSNDDNIRAMEREVNVYYKELWGPKPGYQLLTNQLQRLCMVL
DVYLETEPHDPSVEGPKEFPQEKMCLRLVRGPLRLKPFKFNYPQGFFSHR
NT seq 2133 nt   +upstreamnt  +downstreamnt
atgtcctccgagtccagcaagaagaggaagcccaaggtgatccgcacagacggggtccca
gccgagggcaagcggggcaagggcgacacagaccaggagacacaaacactcctctggaga
gtaagcacaaagctggaagatccctcagggatttgcatggtgccttcaaagcctcccgat
gtcaggtactacagcgaggagagcgaggtggatctgcgcgaccccatcaaggactacgag
ctctacagggagacctgccaggagctccagaggctcatggcagagatccaggagctgaag
agccggggcatcaaggaaaatgcctccgagatcgacgagcggcgcgtccagagctgcgtc
cacttcatgaccctgaagaagctgaaccgcctggctcacatccggctgaagaagggcagg
gaccagacccacgaggcgaagcagaaggtcgatgcctatcacctgcagctccagaacctg
ctctacgaggtgatgcacctgcagaaagagatcaccaagtgcctggagttcaaatccaaa
catgaggagatcgagctggtgagcctggaggagttctacaaagaggccccccctgaaatc
agccgccctgccatcaccctgaccgagccccaccagcagaccctggcccgcctggactgg
gagctggagcagcgcaagaggctggcagagaagtacaaggagtgtctgaccagcaaggag
aagatcctgaaggagatcgaggtgaagaaggaatatctgagcagcctccagcctcgactc
aacagcatcatgcaggcctccctgcctgtccaggagtacctgttcatgccctttgaccag
gctcacaagcagtacgagaccgcccggcacctcccgccgcctctctatgtcctctttgtc
caagccagcgcctacggacaggcctgtgataagaagctggtggtggccattgaagggagt
gtggaggaagccaaggccctttataagccacctgaggactcgcaggatgatgagagcgat
tccgacgcagaggaggagcaaaccacgaagcggcgcaggcccaccctgggcgtgcagctg
gatgacaaacgcaaggagatgctgaagagacaccccttgtcagtcaccctcgacctgaag
tgcaaagatgagaacgtgcttcacctgaccttccactacctgatgaacctcaacatcatg
acagtgaaagccaaggtgaccactgccatggagatgaccacagccatcagtgctggggac
ctgctctccccagactccctcctcaactgcctctatccaggggaccacgggaggaaaacg
cccaacccggccaaccagttccagtttgataaagtgggcatcctgaccctgagtgactac
atgacagagctgggacacccctacgtgtgggtgcagaagctgggtggcctgcatttcccc
aaggatcagcctcagcacacggtggctgctgacaattccctgagtgccagccacatggag
ctgacggtgaagctgctccggagccgcctgcagtcccgcctggccctgcacaagcagttt
gcttccctggagcacggtgttgtgccggtgtccagcgagtgccagcagctcttcccgacc
aaaatcgtctcgcgcctggtgaagtggactgccattccctacgaggattatgctgagctg
ccctacactaaggatgtgatagaggctggcttggctgaagacactcacctctattacatg
gctctgatagagaggggaacagccaagctccaggcggccgtggtgctgaatcctggttat
tccacgctgcctcccgtcttcagcctgtgcctgaactggaagggagagcggaacagcagc
aacgacgacaacattcgggccatggaaagggaggtcaatgtctactacaaggagctgtgg
ggtcccaaacctggctaccagctcctcaccaaccagctgcagcgcctgtgcatggtgctg
gacgtgtacctggagacagagccccacgatcccagcgtggaggggcccaaggaattcccc
caggagaagatgtgtctgcgcctggtcaggggtcccctgcgcctgaaaccgttcaagttc
aactacccccaggggttcttcagccatcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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