KEGG   Paenibacillus mucilaginosus 3016: PM3016_5247
Entry
PM3016_5247       CDS       T01757                                 
Name
(GenBank) primosome assembly protein PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
pmq  Paenibacillus mucilaginosus 3016
Pathway
pmq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PM3016_5247
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmq03400]
    PM3016_5247
Enzymes [BR:pmq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PM3016_5247
DNA repair and recombination proteins [BR:pmq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PM3016_5247
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII PriA_CRR Helicase_C PIF1 AAA_30 zinc-ribbons_6 AAA_19 SPOUT_MTase_2 Zot SLFN-g3_helicase HTH_IclR T2SSE ADDB_N Flavi_DEAD TrwB_AAD_bind DAP3 YjdM_Zn_Ribbon
Other DBs
NCBI-ProteinID: AFC31960
UniProt: H6NQW7
Position
complement(6270094..6272595)
AA seq 833 aa
MNRSMYAKVIVDVPARPTNRAFDYSIPEHMRELVAVGSRVGVPFGPRTVQGFVVELHPGT
QLDPSKVKPIKTAMDLQPPLTEELVKLASWISRTYLCHEVTALQAMIPGALKAKYERHVK
AAEPGASGLLPLLLPGQEEILAYVRRQETVELQSLMDKFADDAGLVKGLLDEGFLVEIQM
VKDRMSAKKALTVFAPEDPSQLEAWLGELPAKAAKQREVLEHFIRQPEPMKLTDLLTELN
LSAGSVKALADRGWLRIEEVEVQRDPYASRTFKPTSPLPLTPEQAGVYERIRDAVLSERQ
RVFLLHGVTGSGKTEVYLQSIQTCLDQGREAIVLVPEIALTPQMVERFKGRFGNRVAVLH
SRLSHGERYDEWRKIARREVSVVIGARSAIFAPFTKIGLIIIDEEHETTYKQEESPKYHA
RDVAIARAAEHGASVILGSATPSLESMYRTTNEAAAAATPERPAFELLSMPSRVEGRPLP
PVRIIDMREELKSGNRSMFSRDLYKAIEERLHKKEQIVLLLNRRGYATFVMCRTCGYVAD
CPHCDISLTYHQSSRAIRCHYCGYAERELSLCPDCGSEHIRHFGTGTQRVEEELAKLFPG
IRVIRMDVDTTTEKGSHEKWLTMFGNRQADVLLGTQMVAKGLDFPYVTLVGALAADSVLN
LPDFRAAERTFQLLTQVAGRAGRHQLPGEVYVQTYTPEHYSIVSASRHDYMGFMRKEMMM
RRLHNYPPFHRLVLITLSHEQVQLLIRSGEVLAARLKELAEDRRDQGGELEVLGPVASPI
SRIKDRYRFQCMIKYRGDQDIAQIVEQAASVLEDAVKTQKLTVSIDVDPQLLM
NT seq 2502 nt   +upstreamnt  +downstreamnt
atgaaccgaagcatgtatgcgaaagtgatcgttgatgttccggcccggcccaccaaccgg
gcctttgattacagcatccccgagcacatgagggagctcgtggccgtgggctcgcgggtg
ggggtgcctttcgggccccgcaccgtgcagggcttcgtagtcgagctgcatccgggcacg
cagctcgatccgtcgaaggtcaagccgatcaagacggctatggacctgcagcctccgctg
acggaggagcttgtgaagctcgcgagctggatctcccggacgtacctgtgccatgaggtt
acggcgctgcaggcgatgattccgggcgcgctcaaagccaagtacgagcgccacgtgaag
gcggcggagccgggggcctccggcctgctgcctcttctgcttcccgggcaggaggagatt
ctggcctacgtccggcggcaggagacggtggagctccagtccctgatggacaagttcgcg
gacgacgcgggactggtgaagggactgcttgacgagggcttcttggtcgagatccagatg
gtcaaggaccggatgtccgccaagaaggcgctgacggtcttcgctccggaggatccgtcg
cagctcgaagcctggctcggcgagctgccggcgaaggcggcgaagcagcgcgaggtgctg
gagcatttcatccggcagccggagccgatgaagctgacggatctgctcacggagctgaac
ctgtcggcgggcagcgtgaaggcgctggcggaccggggctggctgcggatcgaggaagtc
gaggtccagcgggacccgtatgcctccaggaccttcaagccgacgtcgcccctgccgctg
acgccggagcaggccggcgtgtacgaacgcatccgggatgcggtgctgtcggagcggcag
cgggtattcctgcttcacggggtcaccggcagcggcaagacggaggtgtacctgcagtcg
atccagacctgtctggatcaagggcgcgaagcgatcgtgctcgtgcccgagatcgccctg
acgccccagatggtcgagcgcttcaaggggcgtttcggcaaccgggtggcagtgctgcac
agcaggctgtcgcacggagaacgctatgacgagtggcgcaagatcgcacgccgggaagtc
agtgtcgtcatcggcgcgcggtcggcgatttttgccccttttaccaagatcggacttatc
attattgatgaagagcacgaaacgacatacaagcaggaagagagccccaagtaccatgcg
cgtgacgtggcgatcgcccgggcggcggagcacggcgcttccgtcattctcggctcggct
acgccgtcgctggagagcatgtaccgcacgacgaacgaagcggcggcagcggccaccccg
gagcgccccgcgttcgaactgctgtcgatgccgagccgggtggaaggccggccgctgcct
ccggtgagaatcatcgatatgcgggaggagctcaagagcggcaaccggtccatgttcagc
cgcgatctgtataaagcgatcgaagaacggttacacaagaaagaacagatcgttttgctg
ctgaaccgccgggggtatgcgacgttcgtcatgtgccgaacctgcggctatgtcgccgac
tgtccgcactgcgatatctcgctgacataccaccagagctcgagggcgatccgctgtcac
tactgcgggtatgccgagcgggagctgtcgctgtgtcccgactgcggaagcgagcatatc
cgccacttcggcaccggaacccagcgggtcgaggaggagctggccaagctgttccccggc
atccgggtcatccggatggatgtggacacgacgacggagaagggctcgcacgagaaatgg
ctgacgatgttcggcaaccggcaggcggatgtgctgctcggcacccagatggtcgccaag
gggctcgacttcccctatgtgaccctggtcggagcgctcgctgcggattccgtgctgaac
ctgccggacttccgggcggcggagcggacgttccagctgctgacccaggtggccggtcgg
gcggggcgacatcagcttcccggcgaagtgtatgtgcagacgtacacgccggagcattac
agcatcgtctccgccagccgccacgattatatgggcttcatgcgcaaagagatgatgatg
cgccggcttcataactatcctccgttccaccggcttgtgctcatcacgctgtcccacgaa
caggtgcagctgctgatccgctcgggcgaggtgctggcggcccggctcaaggagctggcg
gaggaccgccgggaccagggcggggagcttgaggtgctaggtcccgtagcgtcgccgatc
tcgcggatcaaggatagatatcggttccaatgcatgataaaatatcggggagatcaggac
atcgcccagatcgtggaacaggcggcctccgtactggaggacgccgtgaagacacagaag
ctgacggtgtcgatcgatgtggatccccagctgctgatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (30)   

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