KEGG   Proteus mirabilis HI4320: PMI2044
Entry
PMI2044           CDS       T00753                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase (glycine cleavage system L protein)
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pmr  Proteus mirabilis HI4320
Pathway
pmr00010  Glycolysis / Gluconeogenesis
pmr00020  Citrate cycle (TCA cycle)
pmr00260  Glycine, serine and threonine metabolism
pmr00280  Valine, leucine and isoleucine degradation
pmr00310  Lysine degradation
pmr00380  Tryptophan metabolism
pmr00620  Pyruvate metabolism
pmr00630  Glyoxylate and dicarboxylate metabolism
pmr00640  Propanoate metabolism
pmr00785  Lipoic acid metabolism
pmr01100  Metabolic pathways
pmr01110  Biosynthesis of secondary metabolites
pmr01120  Microbial metabolism in diverse environments
pmr01200  Carbon metabolism
pmr01210  2-Oxocarboxylic acid metabolism
pmr01240  Biosynthesis of cofactors
Module
pmr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pmr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pmr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pmr_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pmr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PMI2044 (lpdA)
   00020 Citrate cycle (TCA cycle)
    PMI2044 (lpdA)
   00620 Pyruvate metabolism
    PMI2044 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    PMI2044 (lpdA)
   00640 Propanoate metabolism
    PMI2044 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PMI2044 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    PMI2044 (lpdA)
   00310 Lysine degradation
    PMI2044 (lpdA)
   00380 Tryptophan metabolism
    PMI2044 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PMI2044 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmr04147]
    PMI2044 (lpdA)
Enzymes [BR:pmr01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PMI2044 (lpdA)
Exosome [BR:pmr04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PMI2044 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_oxidored NAD_binding_8 AlaDh_PNT_C HI0933_like FAD_binding_2 Thi4 FAD_binding_3 DAO Lycopene_cycl
Other DBs
NCBI-ProteinID: CAR44099
UniProt: B4F0Y6
Position
complement(2199158..2200585)
AA seq 475 aa
MSTEIKAQVVVLGAGPAGYSAAFRCADLGLDTVLVERHSTLGGVCLNVGCIPSKALLHVA
KVIEEAKALSEHGVVFDAPKTDIDKIRIWKDKVISQLTGGLAGMAKGRKVNVVNGEARFT
GSHTLSVEGSEGTTTITFENAIVAAGSRPIELPFIPHEDPRVWDSTDALQLKTVPERLLV
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKKFNLMLETKVTA
VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGKAGIEVDDRGFIHVDKQ
MRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GMTEKEAKEKGVSYEVATFPWAASGRAIASDCADGMTKLIFDKETNRVIGGAIVGSNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLYESIGMAAEVFEGSITDLPNPKAKKKK
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgagtactgaaattaaagcacaggtagtggttctcggtgcaggccctgcgggttattcc
gcggcgttccgttgcgctgacttaggtttagatacagttttagttgaacgtcactctaca
ttaggtggtgtttgtctgaacgtggggtgtatcccttctaaagcgttactccacgttgct
aaagtaatcgaagaagcgaaagcattatctgaacacggtgtcgtttttgatgcaccgaaa
acagatatcgacaaaattcgcatctggaaagacaaagttatttctcagttaaccggtggc
ttagctggcatggctaaaggccgtaaagtaaatgttgttaacggcgaagctcgattcaca
ggctcacatacattgtctgttgaaggtagtgaaggtacaacaacaatcactttcgaaaat
gctatcgttgccgcaggctctcgtccaatcgaattaccttttattccacatgaagatcca
cgtgtgtgggattcaacagatgcactacaactgaaaacagtaccagagcgtttactggtc
atgggtggtgggatcatcggtttggaaatgggtaccgtttatcatgcgttgggttcacaa
attgacgtggttgaaatgttcgaccaagttatcccagcggcagataaagacgtagttaaa
gtctttactaaacgtatcagcaaaaaattcaatctgatgctagaaaccaaagtgaccgcc
gttgaagcaaaagaagatggtatctatgtcacaatggaaggcaaaaaagcacctgctgag
cctcaacgttatgatgctgtattagttgctatcggtcgtgtaccaaatggtaaattatta
gacgcaggtaaagctggtattgaagttgatgatcgtggctttatccatgttgataaacaa
atgcgtactaatgtacctcacatctttgcgattggtgatattgttggtcaaccaatgctg
gcacacaaaggtgttcatgaaggtcacgttgctgctgaagttatctctggtaagaaacat
tactttgatcctaaagttattccatcaatcgcttatactgagccagaagttgcatgggtt
ggtatgactgaaaaagaagcgaaagagaaaggtgttagctatgaagtagcaactttccct
tgggcagcatctggtcgtgcaattgcatcagactgtgcagatggtatgactaaactgatt
tttgacaaagaaaccaaccgtgttatcggtggggcaattgtcggctctaacggtggtgaa
ctgttaggtgaaattggtttagctattgaaatgggttgtgatgctgaagatatcgcatta
accatccacgctcacccaacgctatacgaatcaatcggtatggctgcggaagtatttgaa
ggtagcatcactgacctgccaaatccaaaagcgaaaaagaaaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (86)   

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