KEGG   Prunus mume (Japanese apricot): 103318765
Entry
103318765         CDS       T03196                                 
Name
(RefSeq) protein PELOTA 1 isoform X1
  KO
K06965  protein pelota
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103318765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmum03019]
    103318765
Messenger RNA biogenesis [BR:pmum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103318765
SSDB
Motif
Pfam: eRF1_1 eRF1_2 eRF1_3
Other DBs
NCBI-GeneID: 103318765
NCBI-ProteinID: XP_008218421
Position
LG1:26275116..26283492
AA seq 379 aa
MKIVRKDLVPGGPGSVKMIPVDSDDLWYAYNLIAPGDIVMAVTVRKVLRESASGGRDAER
VKLKLEIKVEEVADYDKVGAVLRIRGKNILENEYVKIGAFHTLELELQRPFVLRKDVWDS
LALHELNQASDPAASADLAVILMQEGLAHVLLVGKSMTITRSRIETSIPRKHGPAIAGYE
SALSKFFENVLQAFLKYVDFSVVRCAVIASPGFTKDQFHRHLLLEAERRQLRSIIENKSR
IILVHTSSGYKHSLREVLDAPNVMNMIKDTQAAQEVRVLQDFFGMLSNDPDRACYGPKHV
EVAHERMAIQTLLITDELFRNADVVARQKYANLVKSVKDSGGTVHIFSSLHVSGEQLAQI
TGIAAILRFPLPDLDDIEM
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgaagattgttcgcaaggaccttgttccaggcggacccggcagcgttaagatgataccg
gtcgattccgatgatctatggtatgcttataatttgattgctccaggagacatagttatg
gctgtcactgttaggaaagttctgagagaaagtgcttccggtggaagagatgcagagcgt
gtgaaactgaagttagagataaaagttgaggaggttgctgattatgacaaagtaggagct
gtcttgcgtatacgtggaaagaatatcctggagaatgaatatgtaaagataggagcattt
cacactttggaacttgagctgcagcgaccttttgtgttaagaaaggatgtctgggactca
ttggccttgcacgaactcaatcaagcctctgatcctgctgcaagtgctgatctagctgtg
atcttaatgcaagaaggattagcacatgttctccttgttggtaaaagtatgacaattact
cgttcacggatagaaacttcaattcctcgcaagcatggacctgccattgcaggttatgag
tcggctttgagtaaattctttgagaatgtattacaggctttcttgaagtatgttgatttc
agtgttgtccgctgtgctgtgattgcaagtccaggtttcacaaaggatcagtttcatcgt
cacctattgttggaggcagaaagaagacagctgagatctatcattgaaaacaagtcgcga
ataattcttgtgcatacaagctcaggttacaagcatagtttgagggaggttctggatgct
ccaaatgttatgaatatgattaaagatactcaagcagcacaagaggtccgagttctccaa
gatttctttggcatgctttcaaatgatccagatcgtgcatgctatggaccaaagcatgtt
gaagttgctcatgaacgaatggctatccaaacccttttgataacagatgaactcttcagg
aatgcggatgtagtagcaaggcaaaagtatgccaatttggtgaaatcagtgaaggattca
gggggcactgttcatattttttcttctttgcatgtttcaggagaacaactggcacaaata
actgggatcgctgcaatccttcgtttccctctaccagacctagacgacatagagatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system