KEGG   Prunus mume (Japanese apricot): 103320479
Entry
103320479         CDS       T03196                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103320479
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmum03009]
    103320479
Ribosome biogenesis [BR:pmum03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    103320479
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 103320479
NCBI-ProteinID: XP_008220382
Position
LG2:complement(10907425..10913030)
AA seq 815 aa
MFEAYRTSSIDWKPSPVVALATSVDDSQVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDP
ESRASSLIWCRAGSNGLPCGRLFSSSINGSVSQWDLFHLKQKTVLDSIGVSIWQMAVAPC
SNDTEYKSHPVGNGFIKANSTDPDDPETSDSEDDSDSDETNEQSVVEYPRVALACDDGCV
RIYSITDTDEFVYTKSLPRVGGRVLSVAWSPDAKFIYSGSSDGIIRCWDAKLGHEIYRIT
VGLGGLGSGPELCVWSLLSLRCGNLVSADSTGSVQFWDSQHGTLLQVHSYHKGDVNALAA
APSHNRVFSAGSDGQVILYKLSSETAGSSDDKSSSNVMKKWIYVGLVKAHTHDIRALTVA
VPISREDPLPDEGIKRARRDRHREKPAEFSYHKWAHLGVPMLISAGDDTKLIAYPVKEFT
QFSPHDICPAPQRVSIQLALNTSFNQTSLLLVQASSWIDIMCVRTKSGAFSDMARGPSVG
LASTDLLARVKCKASRKIICSTISNTGVLFAYSDHVKPSLFELKKCKVGKSALTVNKRPL
PQKLPFAHSMVFSFDSSRLIIAGHDRRIYVVDVSRAELVHRFTPCRELHDQELPPSEPPI
TKMFTSSDGQWLAAINCFGDIYVFNLEIQRQHWFISRLDSASVTAGGFSPQNNNVLVITT
SSNQVYALDVEERTLGDWSKQHTNVLPKRFQEFPGEVIGMSFPPSTSSSSVIVYSSRAMC
WIDFGMPIDRDDESDMPNGLQSNSINGKRLKRKLTDSQAKSKLIARKNFEFYAFTNPALF
VGHLSKSSILMIDKPWMEVVKSFNTAPVHRHVFGT
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgtttgaagcttataggaccagctcaatcgattggaagccatctccagtagtagcccta
gccaccagcgtcgacgactctcaagtcgccgcagctcgtgaagacggctcgctcgagatt
tggctagtctctcccggcgccgtcggctggcactgtcagctgacgattcatggtgaccct
gaatcgagagcctcgtcgcttatttggtgtcgtgctggctcgaatggcttgccttgtggt
cggttattctcgtcgagcatcaacggttcggtttcacagtgggatcttttccatttgaag
cagaagactgtgttggattctattggggtctcaatctggcaaatggctgttgcaccgtgt
agtaatgataccgaatataagtcccaccctgttggaaatggctttataaaagctaatagt
actgacccggatgatcctgaaaccagtgatagcgaagacgattccgactcagatgaaact
aatgagcaatcagttgttgagtacccgcgtgtggcattagcttgtgatgatggttgtgtg
cgaatttacagtattactgacactgatgagtttgtttacactaaatcgttgcctagggtc
ggtggacgtgttttgagtgtggcatggagtcctgatgctaaatttatatattcagggagt
agtgatgggattataagatgctgggatgctaaattgggccatgaaatctacaggattact
gttggacttggaggtctgggtagtggaccggaactgtgcgtgtggtctttactttccctt
aggtgtgggaaccttgtaagtgcagacagtactggaagtgttcagttttgggatagtcag
catggtactctattgcaggtgcattcttaccacaaaggtgatgtgaatgctctggcagcc
gctcccagccacaatagggtgttttctgctggttctgatggtcaggttattctttataag
ctttctagtgagaccgcgggatctagtgatgacaagtcttcttctaatgtgatgaagaaa
tggatctatgttggtcttgtaaaagctcatacacatgatattagggcgttgactgtggct
gtaccaatcagcagagaagatccgttgccagatgaaggtataaaaagagcccgtcgagac
cgccatagggaaaagcctgctgagtttagttatcataaatgggcacatttgggtgttccc
atgcttatctctgctggtgatgatacaaagctgatcgcctacccagttaaggagttcaca
cagttctctcctcatgatatctgcccagcacctcagagagtatcaattcaactggcgctt
aatacatcattcaatcaaacatcgttgcttcttgttcaagcttctagttggatagatatc
atgtgtgtacgtacaaaaagtggtgccttttctgatatggctcgtggcccttctgtgggc
ctagcctcaacggatcttctggctagagtcaagtgtaaggcatctcggaagatcatttgc
agcacaatttctaatacgggggtgctttttgcttattctgaccatgtgaaacctagccta
tttgaattgaagaagtgtaaagttggcaaaagtgcattgactgttaataaaagaccactt
cctcagaaactaccgtttgcccattccatggtttttagttttgattcttctcgcttgatc
atagcaggacatgatagaagaatatacgtagtggatgtgagccgagcagaactagtacac
aggtttaccccttgccgtgagttgcatgatcaagaattaccacctagtgagcctcccata
acaaaaatgtttaccagttctgatgggcagtggttggctgccatcaactgctttggagat
atttatgtattcaatctggagatacagaggcagcactggttcatttcaagactagatagt
gcctctgtgacagctggtggattttctccacaaaacaacaatgtgcttgtaatcacaacc
tcctcaaatcaggtatatgcattggatgttgaggaaaggacactgggagactggtcgaag
cagcatacgaatgttctgccgaagagattccaagaatttccaggcgaagttattgggatg
tctttcccaccctccacaagttcatcttctgttattgtttacagttccagggcaatgtgc
tggattgactttgggatgcccattgatcgagacgatgaaagtgacatgccaaacggactg
caaagtaattccattaatgggaagagactaaaacgtaaattgacagacagtcaagctaag
agtaaacttattgctaggaagaattttgaattttatgctttcacaaatccagctttattt
gtgggacatctttccaaaagttctattttgatgatagacaaaccctggatggaagtggtt
aaatctttcaacactgcgcctgtacacagacatgttttcgggacataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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