KEGG   Prunus mume (Japanese apricot): 103329557
Entry
103329557         CDS       T03196                                 
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
  KO
K05391  cyclic nucleotide gated channel, plant
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    103329557
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:pmum04040]
    103329557
Ion channels [BR:pmum04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   103329557
SSDB
Motif
Pfam: Ion_trans cNMP_binding DUF6525 Ion_trans_2
Other DBs
NCBI-GeneID: 103329557
NCBI-ProteinID: XP_008230268
Position
LG4:18899444..18904101
AA seq 632 aa
MCSDPYCTICSTCQSLKSAKQDNPKASRLFDPKIQIAFYGDAKGWFIRSISFLNQYIPGV
MNPHTKAIRQWNKFFVIACLMAIFLDPLFFFVLYAEQDNKCLRIKWYLTFIMVFFRTITD
FIHFLNMLLQFRLAYVAPESRVVGAGEIVDQPKRIALNYIHGKFLVDLFIVLPLPQIIIF
VVLPQYIQSSGANDAKNLLRMAVLFQYIPRLYRFLPLLAGQSPYGFVFESAWTNFIINLL
TFMLAGHIVGSCWYLFGLQRVNQCLRNACHASEIPHDLCMRFIDCGFGRIFTSEPAWDNW
KNNGRANACFDEDGFSYGIYTKAVKLTTADTVTSYVYSLFWGFQQISTLAGNQVPSYFVW
EVLFTMAIIGLGLLLFALLIGNMQNFLQSLGRRRFEMLLRRRDVERWMSYRHLPEELRRQ
VRQAERYNWSATRGVNEEMLLENLPEDLQRDIRRHLFKFVKKVRIFALLEDPVLDAICEK
LKQKTYIKGSKIFYPGGLVEKMVFIVRGRVESIGEDGIVVSLCEGDVCGEELLTWCLEHP
SVNNVRIPGRKLLSNRMVRCLSNVEAFSLRAADLEEFTSRFARFLQNARVQGAIRYESPY
WRGLAAKRIQVAWRYRKKRLSRASFPRSSRLH
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgtgcagtgatccttactgcacaatttgctcaacatgtcagagtttgaaatctgctaag
caggataatcccaaagcttcaaggctttttgatcctaagatccagattgctttctacggc
gatgctaaaggctggtttataagatctatctcttttctaaatcaatatattccaggagtc
atgaatcctcatactaaagccatacgacagtggaacaaattctttgtcatagcttgtttg
atggcaatttttctagaccctttgtttttcttcgtgttatatgcagaacaggataataag
tgtctacgtatcaaatggtacttgaccttcataatggtgtttttcagaacaataactgac
tttattcactttttgaacatgcttcttcagtttaggttggcttatgtggctcctgagtct
agagtggttggtgcaggagagatagtggaccaaccaaagagaattgctctcaattatatc
cacggaaaatttctggttgacttatttattgttttgccacttcctcaaatcataattttt
gtagttttgccacaatacatccaatcatctggagcaaatgatgcgaagaatcttctacgt
atggcagtgctttttcagtacattccaaggttgtataggtttctacctctgcttgctggt
caatctccatatggcttcgtatttgagtcagcatggacgaattttataataaaccttctc
actttcatgttggctggccacattgtcggctcctgctggtacctctttggcttacagagg
gttaatcaatgtcttcgaaatgcctgccatgcctctgaaatcccccatgacttgtgcatg
agattcatagattgtgggtttggtagaatttttacatccgagccagcgtgggataactgg
aaaaataatgggagggctaatgcttgttttgatgaagacggtttctcctatggaatctac
actaaagctgtcaagctcactacagcagataccgtgactagctatgtatactcattgttt
tggggattccagcaaatcagcactctggcaggaaatcaagttccaagctactttgtttgg
gaagtcctttttaccatggcaattatcggactgggcctcttgctctttgctcttctaatt
ggaaatatgcagaattttcttcaatctcttggacggaggagatttgagatgttgttgcga
cgccgtgatgttgaacggtggatgagctatcgccacttgccagaagaactgagaagacaa
gtaaggcaagcagaacggtataattggtctgcaactagaggtgtaaatgaagaaatgctt
ttggagaatttgcctgaagaccttcaaagagatataaggcgccatctcttcaaatttgtg
aaaaaagttcggatttttgccctgctagaagatcctgtcttagatgcaatttgtgagaaa
ctaaaacaaaagacatacatcaaaggaagcaaaatcttttatcctggaggcctggtcgag
aagatggtttttattgtgcgcggaagagtggagagcattggggaggatgggattgttgtt
tccttatgtgaaggggatgtctgcggtgaagaacttctcacatggtgtctagagcatcct
tcagtaaacaatgtcaggatccctggtcggaaattgttgagcaacaggatggtaaggtgc
ttgagtaacgtagaagcattttcactccgagctgcagacctggaagaattcaccagtcgt
tttgcaagattcttacagaatgcacgagtgcaaggagccataaggtatgaatcaccctat
tggagaggtcttgcagcaaagcgaattcaagtagcatggagataccggaagaagcgtcta
agtcgtgcaagcttccctcgctcctctcgcctgcattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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