KEGG   Prunus mume (Japanese apricot): 103331056
Entry
103331056         CDS       T03196                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 35-like
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmum03041]
    103331056
Enzymes [BR:pmum01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     103331056
Spliceosome [BR:pmum03041]
 Complex C
  Other components
   Complex C specific factors
    103331056
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_C_2 SecA_DEAD zf-CCHC
Other DBs
NCBI-GeneID: 103331056
NCBI-ProteinID: XP_016649992
Position
LG5:7077816..7079714
AA seq 612 aa
MGKEDDYVEYVPVAKRRAMEAHKILQRKVKSLGLEEKSDKLKLAAQANPSLLVKAQSEKS
NFVAEEDKPSKPSLLVKSLEMKHEAPKITPIQQMVQQEKEIIDNLSDRKTLMSVGELAKG
ITYTDPIPTGWKPPLHIRRMPMKQCDLIRKQWHIEVSGEDVPPPIKNFKDMRFPERILKT
LKAKGIVQPTPIQVQGLPVILSGRDMIGVASTGSGKTLVFVLPLIMVALQEEIRMPIVPG
QGPFGLIICPSRELAKQIYEVVEEYLVPMREVGYPKIRPLLCIGGVDMRSQLDIIKEGVH
IVVATPGRLKDMLAKKKMNLNNCTYLTLDEADRLVDSGFEDDIRHVFDHFKSQRQTLLFS
ATMPTKVLNFAKSALVKPATVNVGRPGAANLGVIQEVEYVKQEAKFVYLLECLQKTAPPV
IIFCENIADVDGIHIYLLIKGVDAVGIHAGMDQKEREDAISSFKKGKKDVLVATGVVSKG
LDFPDIQHVINYDMPTQIEDYVHRIGRTGRCGKTGIATTFINKNQSEATLLDLKHLLQEA
KQRIPPVLAELNDPMELNADAITNASGVKGCVYCGGLGHRIHDCPKLEQQKRMAISSSRR
DYFGSGGYRGEI
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgggaaaagaagatgattatgttgagtatgttccagtggcgaagcggcgagcaatggaa
gctcataagattcttcaacgcaaggtaaagtctctcgggcttgaagagaagtcagacaag
ttaaagctagctgctcaggcaaaccctagtctccttgttaaagcacagtcggaaaaatca
aattttgttgctgaagaagacaaaccaagcaaacctagtctccttgttaaatcattagag
atgaagcatgaggctcccaagattactccaatccagcagatggtgcaacaagagaaagag
attattgacaacttatcggatcgcaaaacactaatgtcagttggtgaattggcaaaggga
atcacttataccgaccctataccaacaggttggaagcccccattgcatataagaaggatg
ccaatgaagcaatgtgatttgattcgaaagcagtggcatatcgaagttagtggtgaagat
gttccaccacctattaagaatttcaaggacatgagatttcctgaacggattttgaagact
ctgaaggccaagggcattgtccagccgacccccattcaggtgcaaggtcttccggtgatt
ttatccgggagggatatgattggtgttgcgtctactggctcaggaaagacattggttttt
gtgctgccattgattatggttgcattgcaagaggaaattaggatgccaattgttcctggt
caagggccttttggattgatcatttgcccatcaagggagctcgcaaagcagatttatgaa
gtggtggaagagtatctggttcctatgagagaggttggatatccaaagataaggcctttg
ctctgtattggtggagtggatatgcgttcgcaattggacattatcaaggaaggtgttcat
atagttgttgctactcctgggagattgaaggacatgctggcaaagaaaaaaatgaatctc
aataattgcacatatttaactttggatgaggctgatagattggtagattcaggctttgag
gatgacataagacacgtttttgaccactttaaatctcaaagacaaactctcttattttca
gccaccatgcccacaaaagttctcaactttgctaaaagcgctttggtaaaacccgccacc
gtgaacgtgggaagacctggagctgcaaatttgggtgtaattcaggaggttgagtatgtg
aagcaagaggccaagtttgtttaccttcttgaatgtttacaaaagaccgcaccacctgtt
ataatattctgtgaaaacatagctgatgtcgatggcattcatatatatcttctgataaaa
ggagtggatgcagtgggcattcatgcggggatggatcagaaagagagagaggatgccatt
tcttccttcaagaaagggaagaaagatgtcttggttgccactggtgttgtctcaaagggt
ttggattttccggatattcaacatgtcatcaattatgacatgccaacacagattgaagac
tatgtccacaggattggacgaacgggaagatgtggcaagactggaatagcaacaacgttt
ataaacaaaaatcaaagtgaggcaacacttcttgatttgaaacacctcctgcaggaggca
aaacaaaggattccaccggtgttggctgagcttaatgatccaatggaattaaatgcggat
gcaattacaaatgcgagcggggttaagggctgcgtttattgtggcgggcttggtcatcgt
atccatgactgccccaaactggagcaacagaaaagaatggcaatttccagctctagaagg
gattattttggatctggtggttacagaggggaaatatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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