KEGG   Prunus mume (Japanese apricot): 103337914
Entry
103337914         CDS       T03196                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
  KO
K14779  ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmum03009]
    103337914
Enzymes [BR:pmum01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     103337914
Ribosome biogenesis [BR:pmum03009]
 Eukaryotic type
  90S particles
   Helicases
    103337914
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 T4SS-DNA_transf
Other DBs
NCBI-GeneID: 103337914
NCBI-ProteinID: XP_008239307
Position
LG1:20019197..20023605
AA seq 579 aa
MEEGTSFLFAGVSFNRKKFAVDFSRFQKKKESEKTIEDLSFLEIAKPEAEQEEEEEEEPV
VPVKKRKRKAEVSEPVEGISVFKTSKSAKAAKKEIEKPLIERSEQKKKLNKQLERDSLLR
KDHNIHVSGNNIPSPLENFSELSSRYGCESYLLRNLAELGFKEPTPIQRQTIPVLLSGRE
CFACAPTGSGKTLAFVCPMLMKLKHASKDGIRAVILCPTRELADQTTRECKKMAKGNKFY
IKLMTKELARNSDFSKRPCDILISTPLRLRLAIRKKKVDLSRVEYLVLDESDKLFELGLL
KQIDSVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNTASKTIKQKLVF
AGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELLFENIRVSAIHSDLSQTQRE
NAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSAAAYIHRIGRCGRAGRSGEA
ITFYTEADIPYLRNIANVMSASGCEVPSWAMALRKQKWKKHRPGRESISTQPKDEQESTN
KKKKKDEQESTNKKKKRKMSKNRAIVGARELSLVDSSKT
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggaagaaggcacttcgtttttgttcgccggcgtcagcttcaaccggaagaaattcgcc
gtcgatttctccagattccagaagaagaaagagagtgagaaaacgatagaagatttgagc
ttccttgaaattgcaaaacctgaagcagagcaggaggaggaggaagaggaggagcccgtg
gtgcctgttaagaagaggaagcggaaggcggaggtttccgagcctgtggagggaatcagt
gtgtttaagacctcaaaatcagctaaggcagcgaagaaagagatagagaaacctctcatt
gaacgctccgagcagaaaaagaagttaaataagcaacttgagcgtgattcattattgaga
aaggatcataacattcatgtgtccgggaataacatcccttcgccgcttgagaatttttcg
gaattaagctcaagatatggatgtgagtcatatttacttcgcaatttggctgaacttgga
tttaaagaaccaacaccaatccaaaggcagactattccagtcctcttatctggccgggaa
tgctttgcttgtgctccaacaggatctggaaaaacccttgcttttgtttgccccatgctt
atgaaacttaagcatgcatctaaggatggcatccgagctgttattctctgccctacacgt
gaattagctgatcagacaaccagagagtgcaaaaagatggcaaaaggaaataaattctac
atcaagttaatgactaaagagcttgcaagaaattctgatttttcaaaaagaccttgtgat
atactcatttctactccacttcgtttacggttggctatccggaaaaaaaaggttgattta
agcagggttgagtatctggtgttggatgagtctgataagttatttgagcttggcttgtta
aagcagattgattctgtggtcaaagcatgttcaaacccttcaataatacgatccttgttt
agtgctaccttacctgatttcgttgaagagcttgcacgcactataatgcatgatgctgtt
cgagttatcattggcaggaaaaatactgcttctaagactatcaagcaaaaactggttttt
gctggaagtgaagaagggaaacttttagcacttcgtcaaagctttgcagagagtctgaat
ccaccagtgttgatatttgtacaaagcaaggagcgagctaaggaactctatggagaactg
ttgtttgagaacataagagttagtgccatacattctgatttgtcgcaaacacagcgagaa
aatgctgttgatgacttcagagctggaaaaacatgggttttaattgccactgatgttatt
gctcgcggtatggatttcaaaggtgtcaactgtgtgattaattatgactttccagattct
gctgctgcttacattcacaggattggtcgatgtggaagagcagggaggagtggagaagct
attactttctacacagaggcagatattccatatttacggaatatagctaatgtgatgtcc
gcatcaggttgtgaggttccgtcttgggccatggccttgcgcaaacagaagtggaaaaag
caccgtcccggaagagaatcaatatcgactcaaccgaaagatgagcaagaatctaccaac
aaaaaaaagaagaaagatgagcaagaatctaccaacaaaaaaaagaaaagaaagatgagc
aagaatagagcaattgtcggagctagggagttatctttagtcgacagttccaaaacatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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