KEGG   Prunus mume (Japanese apricot): 103340032
Entry
103340032         CDS       T03196                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF185-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103340032
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmum04121]
    103340032
Enzymes [BR:pmum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103340032
Ubiquitin system [BR:pmum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103340032
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 zf-ANAPC11 Prok-RING_4 Baculo_IE-1 U-box zf-RING_6 zf-rbx1
Other DBs
NCBI-GeneID: 103340032
NCBI-ProteinID: XP_008241618
Position
LG8:complement(10540703..10542418)
AA seq 225 aa
MASGFGESTSVPPQSPSCSGNNANEVGDFECNICFDLAQDPIITLCGHLFCWPCLYRWLH
HHSHSQECPVCKALVQEEKLVPLYGRGKMQTDPRSKSYPGINIPNRPAGQRPQTAPPPET
NQFTNYGFGFMGGFVPMATARIGNFTLATAFGGLIPSLLNIHYHGFPDATVYGTTSGFPY
GFSSFHGGHAHGFPQPASQRQQVDNVLKNLFLLIGVFVILALICW
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcaagtggttttggggaatcaacaagcgtgccaccccaaagcccgtcttgctcgggc
aataatgccaatgaagttggcgattttgaatgcaatatctgctttgacttagcccaagac
ccaatcataaccctttgtggtcacctcttctgctggccttgcctgtacagatggctccac
catcactcgcattcccaagaatgcccggtttgcaaggccctcgtacaagaggagaagttg
gttcctctttatggtaggggcaagatgcaaactgatccaagatcaaagtcatatccaggc
atcaatattccaaatcgcccagctgggcagaggcctcaaactgcccctcctccggagacc
aatcagtttaccaattatggctttggattcatggggggatttgtaccaatggcaactgcg
aggattggtaacttcacattggccactgcatttggtggtctgataccgtcattgcttaac
attcattatcatgggttcccggatgctactgtgtatggaacaacttctggtttcccttat
gggttcagttcatttcacgggggccatgctcatggattccctcagccggcaagtcaaagg
cagcaggttgacaatgttttgaagaatctttttttgttaattggtgtctttgtgatcctt
gcgctgatttgttggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

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