KEGG   Pasteurella multocida subsp. multocida HN06: PMCN06_0894
Entry
PMCN06_0894       CDS       T01776                                 
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
pmv  Pasteurella multocida subsp. multocida HN06
Pathway
pmv03030  DNA replication
pmv03430  Mismatch repair
pmv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PMCN06_0894 (holC)
   03430 Mismatch repair
    PMCN06_0894 (holC)
   03440 Homologous recombination
    PMCN06_0894 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmv03032]
    PMCN06_0894 (holC)
   03400 DNA repair and recombination proteins [BR:pmv03400]
    PMCN06_0894 (holC)
Enzymes [BR:pmv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PMCN06_0894 (holC)
DNA replication proteins [BR:pmv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PMCN06_0894 (holC)
DNA repair and recombination proteins [BR:pmv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PMCN06_0894 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: AFF24143
Position
complement(970863..971291)
AA seq 142 aa
MSKHAQFYLLSEQAQMEKMACDFAASAWRLGKRVLIACETEQQALDIDEALWAREADEFV
PHNLSGEVTTYATPIEVSWKGKRNAQRRDLLINLQAEVPDYVSSFTQVIDFVPVEEHLKV
LARERYKQLRQLGWQLSTEQIK
NT seq 429 nt   +upstreamnt  +downstreamnt
atgtctaaacacgcgcaattttatttgttaagcgagcaagcacaaatggaaaaaatggct
tgtgattttgccgcatccgcgtggcgtcttggtaagcgcgtgttaattgcttgcgaaact
gaacaacaagcgttggatattgatgaagccttatgggcaagagaggcagatgagtttgtg
ccgcataatttatcaggtgaagtgacgacgtatgctacaccgattgaggtgagctggaaa
ggtaagcgtaatgcgcaacgcagagatctcttgattaatttacaggcagaggtaccagat
tatgtcagcagttttacacaggtgattgattttgtgccagtggaagagcatttaaaagtg
ctagccagagagcgttataaacaattacgacaacttggctggcaattatcaacagagcaa
atcaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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