KEGG   Polaromonas naphthalenivorans: Pnap_3963
Entry
Pnap_3963         CDS       T00459                                 
Name
(GenBank) DNA topoisomerase III
  KO
K03169  DNA topoisomerase III [EC:5.6.2.1]
Organism
pna  Polaromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:pna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pna03032]
    Pnap_3963
Enzymes [BR:pna01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Pnap_3963
DNA replication proteins [BR:pna03032]
 Prokaryotic type
  DNA Topoisomerases
   Pnap_3963
SSDB
Motif
Pfam: Topoisom_bac Toprim_Crpt SWIB Toprim PADR1_Zn_ribbon Ykof OrfB_Zn_ribbon YjdM_Zn_Ribbon zf_Rg TF_Zn_Ribbon
Other DBs
NCBI-ProteinID: ABM39258
UniProt: A1VUD0
Position
complement(4229131..4232103)
AA seq 990 aa
MKTLVIAEKPSVAQDIVRALTPTAGKFEKHDEYFESDDWVITSAVGHLVEIQAPEEFDVK
RGKWSFANLPVIPPYFDLKPMDKTKTRLNAIVKLTKRKDIGALVNACDAGREGELIFRLI
QQYAKSKHPVRRLWLQSMTPAAIRDGFAALRSDAQMLPLADAARCRSEADWLVGINGTRA
MTAFNSRDGGFFLTTVGRVQTPTLSVVVEREEKIRKFVSRDYWEIHALFSAEAGEYPGKW
FDPKFKRAAANADNAEPDPELKADRLWTEREARAIADAVRGQTATVTEESKPTTQAPGLL
FDLTSLQREANGKFGFSAKTTLSIAQSLYERHKALTYPRTDSRALPEDYVPVVKQTFEML
ATSGMNHLAPHAATALKGNYIKPTKRIFDNAKVSDHFAIIPTLQAPSGLSEAEQKLYDLV
VRRFMAVFFPNAEYLVTTRISVSVGHSFKTEGKVLVKPGWLAIYGKEAAAEVPEAKEGDK
GQSLVPVKPGERVGVEAADAKALKTRAPARYSEATLLGAMEGAGKTIDDDELREAMQEKG
LGTPATRAATIEGLIAEKYMLREGRELIPTAKAFQLMTLLRGLDVQELSKAELTGEWEFK
LAQMEHGKLSRETFMAEIAAMTKNLVAKAKGYSRDSVPGDYATLQARCPNCGGVIKENYR
RYTCTGATGDGEGCGFSFGKTPAGRTFELAEVEQFLRDKKIGPLEGFRSKAGWPFTAEMV
LKFDEETKNYKLEFDFGDDKNADTGEIVDFGDQESLGACPKCAANVYELGKNYVCEKSVP
TLEQPTPSCDFKTGQVILQQPIEREQMSKLLATGKTDLLDKFVSMRTRRAFKAMLVWDAE
AGKVNFEFAPSKFPPKPGAAPRAGAGTIKTPFGKTVAVKAAAAPAAKKAAVKKVAAKKSA
AASDKPKAVRKAAAPGAGLKPSDALAAIIGSEQVARPQVIKKLWDYIKDQNLQDPANKRA
INADAKLLPVFGKPQVTMFELAGIVGKHLS
NT seq 2973 nt   +upstreamnt  +downstreamnt
atgaaaacactggtaattgccgaaaaaccatcggtcgcgcaagacatcgtgcgcgccctc
acgcccacggcgggcaagtttgaaaagcacgacgagtactttgaaagcgacgactgggtc
atcacctccgccgtcggccacctggtcgaaatccaggcgcccgaagagttcgacgtgaag
cgcggcaagtggagctttgcgaacctgccggtgattccgccgtacttcgacttgaagccg
atggacaagaccaagacgcggctcaacgccatcgtcaagctgaccaagcgaaaagacata
ggcgcgctggtcaacgcctgcgacgcgggccgcgagggcgaactgatcttccggctgatc
cagcaatacgccaagagcaagcacccggtcaggcggctgtggctgcagtcgatgacgccg
gcggccatccgcgacggctttgccgcgctgcgcagcgacgcgcagatgctgccgctggcc
gacgccgcgcgctgccgctccgaggccgactggctggtcggcatcaacggcacgcgcgcc
atgacggccttcaattcgcgcgacggcggcttcttcctgaccaccgtcggccgggtgcag
acgccgacgctgtcggtggtcgtcgagcgcgaggaaaaaatccgcaagttcgtcagccgc
gactactgggaaatccacgccctgttttcggccgaagccggcgaatacccgggcaaatgg
ttcgacccgaagttcaagcgcgccgccgccaatgcagacaatgccgagcccgaccccgag
ctgaaggccgaccggctgtggaccgagcgcgaggcgcgcgcgattgccgacgcggtgcgc
ggccagaccgccacggtgaccgaggaatcgaaacccaccacgcaggcgccggggctgctg
ttcgatttgacttctttgcagcgcgaagccaacggcaagttcggcttttcggccaagacc
acgctgtcgattgcgcaaagcctgtacgagcgccacaaggcgctgacctacccgcgcacc
gactcgcgcgcgctgcccgaggactatgtgccggtggtgaagcagaccttcgagatgctg
gccacgagcggcatgaaccacctcgcgccgcatgccgcgacggccctcaagggcaattac
atcaagccgaccaagcgcatcttcgacaacgccaaggtcagcgaccacttcgccatcatc
ccgacactgcaggcgcccagcggcctgagcgaggccgagcaaaagctctatgacttggtg
gtgcgccgcttcatggcggtgtttttcccgaacgccgaatacctggtgacgacgcggatt
tcggtgtcggtcggccacagcttcaagaccgaaggcaaggtgctggtcaagccgggctgg
ctggcgatctacggcaaggaagctgccgccgaagtgcccgaggccaaggaaggcgacaag
ggccagagcctcgtgccggtcaaacccggcgagcgcgtcggcgtcgaggccgccgatgcc
aaggccctgaaaacccgcgcgcccgcccgctacagcgaagccacgctgctcggcgcgatg
gaaggcgcgggcaagacgattgacgacgacgagctgcgcgaagccatgcaggaaaaaggc
ctgggcacgccggccacccgcgccgccacgattgaaggcctgatcgccgaaaaatacatg
ctgcgcgaaggccgcgagctgatcccgacggccaaggccttccagctcatgacgctgctg
cgcgggctggatgtgcaggagctgtccaaggccgagctgaccggcgagtgggagttcaag
ctcgcgcagatggaacacggcaagctcagccgcgagaccttcatggccgagattgccgcc
atgacgaagaacctggtcgccaaggccaagggttacagccgcgacagcgtgcccggcgac
tatgcgacgctgcaggcgcgctgcccgaactgcggcggcgtgatcaaggaaaactaccgc
cgctatacctgcaccggcgccaccggcgacggcgaaggctgcggcttcagctttggcaaa
acgccggccggccggacctttgagctggcggaagtcgagcagtttttgcgcgacaagaaa
atcggcccgctggagggttttcgctccaaggcgggctggccgttcaccgccgagatggtg
ctcaagttcgacgaggaaacgaaaaactacaagctcgaattcgatttcggcgacgacaaa
aatgccgacaccggcgagatcgtcgattttggcgaccaggaatccctgggcgcgtgcccg
aaatgcgccgctaacgtgtacgagctgggcaagaactacgtctgcgaaaaatccgtgccc
acgctggagcagccgacgccaagctgcgacttcaagaccggccaggtgatcctgcagcag
cccatcgagcgcgagcagatgagcaaactgctggccaccggcaagaccgacctgctcgac
aagttcgtctcgatgcgcacgcgccgcgccttcaaggccatgctggtgtgggacgcggaa
gcgggcaaggtgaattttgaattcgccccgtccaagttcccgcccaagccgggcgcggcg
cccagggccggcgctggcacgatcaagacgccgttcggcaagaccgtggcggtcaaggct
gcggccgcgccggctgcgaagaaagccgcggtcaagaaagtggccgccaagaaatcagcc
gccgccagcgacaagcccaaggcggttcgcaaggcggccgcgcccggcgccggcctcaag
cccagcgacgcgctggccgccatcatcggcagcgaacaggtcgcgcgtccgcaggtcatc
aagaagctgtgggactacatcaaggaccagaacctgcaggacccggccaacaagcgcgcc
atcaacgccgacgccaagctgctgccggtgttcggcaagccgcaggtgacgatgttcgag
ctggcaggcatcgtgggcaagcatttgagctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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