KEGG   Pseudomonas aeruginosa NCGM2.S1: NCGM2_5844
Entry
NCGM2_5844        CDS       T01974                                 
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pnc  Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pnc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NCGM2_5844 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pnc03400]
    NCGM2_5844 (mutM)
Enzymes [BR:pnc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     NCGM2_5844 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     NCGM2_5844 (mutM)
DNA repair and recombination proteins [BR:pnc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     NCGM2_5844 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS DZR
Other DBs
NCBI-ProteinID: BAK92655
Position
1:complement(6229314..6230126)
AA seq 270 aa
MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVRLSGQRIVSVERRAKYL
LLGAEAGTLISHLGMSGSLRLVESGTPASRHEHVDIELVSGMALRYTDPRRFGAMLWSLA
PLEHELLRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVGVGNIYASEALFAA
GIDPRKPAGSISKARYLRLAEEIKRILAIAIERGGTTLRDFVGGDGQPGYFQQELFVYGR
GGEFCKVCGSTLREIRLGQRASVYCPRCQR
NT seq 813 nt   +upstreamnt  +downstreamnt
atgcccgaactacccgaagtcgaaaccacccgccggggcatcgccccctacctcgaaggc
cagcgcgtcgagcgcgtgatcgtgcgcgagcggcgcctgcgctggccgatccccgaagac
ctggacgtgcgcctgtccggacaacgcatcgtcagcgtcgagcgccgcgccaagtacctg
ctgctgggcgccgaggccggtacgctgatcagccacctgggcatgtccggcagcctgagg
ctggtggagagcggcaccccggccagtcgccacgagcacgtcgacatcgagttggtctcg
ggcatggccctgcgctacaccgatccgcggcgcttcggcgccatgctctggagcctggcg
ccactggaacacgagctgctgcgcaacctcggcccggaaccgctgaccgacgctttcgcc
ggccagcgtctgttcgagctgtcgcgcgggcggagcatggcggtcaagccgttcatcatg
gacaacgcggtggtggtcggggtcggcaacatctacgccagcgaagcgctgttcgccgcc
ggcatcgatccgcgcaagcccgccgggagcatctccaaggcgcgctacctgcgcctggcg
gaggagatcaagcggatcctggcgatcgccatcgagcgcggcggcaccaccctgcgcgat
ttcgtcggcggcgacggccagcccggttacttccagcaggaattgttcgtctatggccgt
ggcggggagttctgcaaggtctgcggcagcaccctgcgcgagatccgcctaggccagcgc
gccagcgtgtactgcccgcgctgccaacgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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